Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7823 82.4 1e-10 >seq7823 Length=30824 Score = 82.4 bits (90), Expect = 1e-10 Identities = 136/194 (70%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 11543 CCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATA 11602 ||||||||||| |||| ||| || | ||| | ||||| ||||||| | | | Sbjct 6648 CCATCCATCTCCACTAGTAGTTGGTTTAGTGTATTTTCTCGTTCATCATGGCCACCAAAA 6589 Query 11603 CCACCAGCACTGCGTTG--CTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACAT 11659 |||||| || || | | | || || |||||||| |||||||| || | |||||| Sbjct 6588 CCACCACTACGGCCCCGAGCACGACCTACTGCATCAATTTCATCAATAAAAATAATACAG 6529 Query 11660 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACA 11719 ||| ||||| ||| || | |||| | ||| ||||| || | ||| ||||||||| Sbjct 6528 GGTGCATTTTTGCGTGCTTGTGCAAACAAATCACGAACTCTAGCTGGACCAACACCAACA 6469 Query 11720 AACATCTCCACAAA 11733 |||||||| | ||| Sbjct 6468 AACATCTCAAGAAA 6455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627867801033600