Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq4436 87.8 1e-12 >seq4436 Length=60862 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 118898 CTACTTTTCTCTGAAA-TTCTTTTGACCCATTAGCATTCCAAATAGCAACTCCttttttt 118956 |||| ||| ||| ||| |||| | | ||||||| |||||| || || || |||| | Sbjct 44230 CTACATTTATCTAAAAATTCTCTAGTTCCATTAGAATTCCATATCTGCACACCCTTTTGT 44171 Query 118957 GCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCT 119016 || ||| ||| | ||||||||||| | |||||| | | ||| |||||||| ||| Sbjct 44170 GCAAGAATATTTCCATCAGTAGAACCACTAATAAACCATAACAACTCTTCAACAACACCT 44111 Query 119017 CTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA 119051 ||||||| || ||| ||||| || |||||||| Sbjct 44110 TTCCAAAATACACGTTTGGTTGTTAAAAGTGGAAA 44076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414371144164624