Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2421 141 1e-28 >seq2421 Length=99546 Score = 141 bits (156), Expect = 1e-28 Identities = 206/291 (71%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 23586 TTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGC 23645 |||||||| ||||||||| || ||||| ||||| ||||| ||||| || || || || || Sbjct 31725 TTTTTTAAGCCAAAATATAGCTGCAAAAGATCCTGAAAAAAAAATTCCTTCCACTGCAGC 31666 Query 23646 AAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCA 23705 ||| || |||| |||| | || | ||| || | |||||||||| || ||| Sbjct 31665 AAATGCAACAACACGTTCAGAGAAAGAAGCACAATCTTTGTTAATCCATTTTAGTGCCCA 31606 Query 23706 ATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTC 23765 | || || || ||||| || ||||||||||| || || | | | ||||| Sbjct 31605 AACTGCTTTTTTTTGAACACAGGGCATGGTTTCAATTGCATTAAATAAATTTGACTTTTC 31546 Query 23766 TTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTC 23825 | |||| | || |||||||| |||||| ||||||||| || || || ||||| Sbjct 31545 TATCGGATCTTTAATGAGAGTATCAATGAGTAAAGAATACATTTCTGAGTGGATGTTTTC 31486 Query 23826 AATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATC 23876 ||| ||||| |||||||||||||| ||| ||||| | | |||||| || Sbjct 31485 AATTGCAATTTGAAACCCATAAAATGCTCTTGCTTCTGGTAGTTGAACTTC 31435 Score = 102 bits (112), Expect = 8e-17 Identities = 138/190 (73%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||| |||||||| ||||| |||||||||||||| |||||||||| ||||||| Sbjct 31317 TTTTCATTAACAATTCCATCGCTAGCAGCAAAGAATGCAAGAACATGAGAGATAAAATAC 31258 Query 23959 CTTTCATCAG--TTGATAATTTTTTCC-AATCATTAATATCTTTTGATAAATCAACTTCA 24015 |||| | || || | ||| |||| ||| | ||| | ||||||||||| Sbjct 31257 TTTTCCTGAGGCTTCAGCTTTTCTTCCCAATGAACTGCATCAGCAGCCAAATCAACTTCT 31198 Query 24016 TCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGT 24075 |||||||||||||| || || |||| |||||| ||| ||||| |||| ||| Sbjct 31197 TCAACTGTCCAAAACGAGGCTTCAGCTTGCTTGTACATTTTCCATATATCTTTATATTGA 31138 Query 24076 ATTGGAAATA 24085 |||||||||| Sbjct 31137 ATTGGAAATA 31128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521351656962400