Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq147173 84.2 2e-11 >seq147173 Length=25037 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || |||||||||||| | ||||||||||||||| | || ||||| || || || |||||| Sbjct 19769 GGTGACCTTGGCCCCGTCTACGGCTTCCAGTGGCGTCACTTTGGCGCCGAGTACAAAGAC 19828 Query 18849 TGTCAATCAAACTATTTACAG--CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAA 18906 || | |||| || | || || ||||||||||||| | ||| ||||| || | Sbjct 19829 ATGCACGCGGACTA--CACGGGACAGGGCGTCGATCAGCTGCATAATGTCATAGAGACGA 19886 Query 18907 TTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAA 18958 | || || || || | | || || || || || | | ||||||||||| Sbjct 19887 TCAAGACGAATCCCAACTGTCGCCGTATCATCATGTGCGCGTGGAATCCAAA 19938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398586654795315