Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq183125 86.0 7e-12 seq147173 86.0 7e-12 >seq183125 Length=18962 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || || ||||||||||| |||||||| || |||| | ||| |||| || |||||| Sbjct 6436 GATCCATTGGCGTCCCAAATCTTGACATTTTTCTCGGACAACTCCTTGGCGTTCGTGGAT 6495 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 ||| ||||||||||||| ||||| || || || | |||| || | ||| |||||| Sbjct 6496 CCCTTGATGAACCAGAGAAGCTCCTCAGCCACTCCGCGGAAGAACACACGCTTTGTGGTC 6555 Query 146257 AGCAGGGGGAAC 146268 |||| || ||| Sbjct 6556 AGCAAAGGAAAC 6567 >seq147173 Length=25037 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || || ||||||||||| |||||||| || |||| | ||| |||| || |||||| Sbjct 19119 GATCCATTGGCGTCCCAAATCTTGACATTTTTCTCGGACAACTCCTTGGCGTTCGTGGAT 19060 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 ||| ||||||||||||| || || || ||| |||| |||| || | ||| || ||| Sbjct 19059 CCCTTGATGAACCAGAGAAGTTCCTCAGCGACTCCCCGGAAGAACACGCGCTTTGTTGTC 19000 Query 146257 AGCAGGGGGAAC 146268 |||| || ||| Sbjct 18999 AGCAAAGGAAAC 18988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588687117504280