Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq177713 116 3e-21 seq26467 116 3e-21 seq88483 113 4e-20 seq44755 107 2e-18 seq176294 104 2e-17 seq159113 98.7 8e-16 seq94379 87.8 2e-12 >seq177713 Length=14691 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| || ||||| ||||| ||| || | | ||||||||||||||||| Sbjct 286 GTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGTTTGCCG 227 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || ||||||||||| || | |||||||||||| |||||| |||| Sbjct 226 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTC 167 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | |||||| ||||| ||| ||||||||||| || | || Sbjct 166 ACGTTTTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 107 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 106 TTCACAAAGATCTGCAT 90 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || ||||| || ||||| ||||| ||| || || | ||||||||||||||||| Sbjct 1525 GTAGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCG 1466 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || ||||||||||| || | |||||||||||| |||||| ||| Sbjct 1465 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1406 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | ||||| ||||| ||| ||||||||||| || | || Sbjct 1405 ACGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1346 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 1345 TTCACGAAGATCTGCAT 1329 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || || || ||||| ||||| ||| || || | ||||||||||||||||| Sbjct 1753 GTGGATTCTTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCA 1694 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || ||||||||||| || | |||||||||||| |||||| ||| Sbjct 1693 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1634 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | ||||| ||||| ||| ||||||||||| || | || Sbjct 1633 ACGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1574 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 1573 TTCACGAAGATCTGCAT 1557 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 20995 TGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCT 21054 |||| ||||| ||| || | | ||||||||||||||||| || | || || |||| Sbjct 498 TGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCT 439 Query 21055 GCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTAT 21114 ||||||| || | ||||||||| || |||||| |||||| | ||| || | Sbjct 438 GCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCTTTCACGTTCTCGATCGTGT 379 Query 21115 CACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCA 21174 | | ||||| ||||| ||| ||||||||||| || | || ||||| || || |||| Sbjct 378 CGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCA 319 Query 21175 T 21175 | Sbjct 318 T 318 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || ||||| || ||||| ||||| ||| || | | ||||||||||||||||| Sbjct 1297 GTCGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGTTTGCCG 1238 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || ||||||||||| || | ||||||||| || |||||| ||| Sbjct 1237 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1178 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCC 21148 || | ||| || || | |||||| ||||| ||| ||||||||||| Sbjct 1177 ACGTTCTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTGCC 1128 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 21021 TCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTG 21080 ||||||||||||||||| || | || || ||||||||||| || | |||||||||| Sbjct 1094 TCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTG 1035 Query 21081 TCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATG 21140 || |||||| ||||| | ||| || || | |||||| ||||| ||| ||| Sbjct 1034 TCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATG 975 Query 21141 GTCTTGCC 21148 |||||||| Sbjct 974 GTCTTGCC 967 >seq26467 Length=1226 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||||| ||| |||||||| || ||||| ||||| | Sbjct 810 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 751 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||||||||| || | || || ||||||||||| || Sbjct 750 AGAGTACGACCGTCCTCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGG 691 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | ||| ||||||| ||| || Sbjct 690 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGACC 631 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || || | ||||| ||||| || ||||| Sbjct 630 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 584 >seq88483 Length=20907 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||||| ||| |||||||| || ||||| ||||| | Sbjct 421 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 480 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||||||||||||||| || | || || ||||||||||| || Sbjct 481 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 540 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | ||| ||||||| ||| || Sbjct 541 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGACC 600 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| || || | ||||| ||||| || ||||| Sbjct 601 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 647 >seq44755 Length=507 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| || ||||| ||||| ||| || | | ||||||||||| ||||| Sbjct 228 GTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGCTTGCCG 287 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || ||||||||||| || | |||||||||||| |||||| ||| Sbjct 288 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 347 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || || | |||||| ||||| ||| ||||||||||| || | ||| Sbjct 348 ACGTTCTCGATGGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTT 407 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 408 TTCACGAAGATCTGCAT 424 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 20980 TGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCG 21039 |||| ||||| || ||||| ||||| ||| || || | ||||||||||||||||| | Sbjct 1 TGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAG 60 Query 21040 CATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCA 21099 | | || || ||||||||||| || | ||||||||| || |||||| |||| Sbjct 61 CGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCA 120 Query 21100 CCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTT 21159 | | ||| || || | ||||| ||||| ||| ||||||||||| || | || | Sbjct 121 CGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCT 180 Query 21160 TGACAAATATTTGCAT 21175 | || || || ||||| Sbjct 181 TCACGAAGATCTGCAT 196 >seq176294 Length=1487 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | | ||||| ||| | ||| || |||||||| ||||| ||||| Sbjct 1028 TTCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGC 969 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | || || || ||||| || || | || |||||||||||||| || Sbjct 968 TAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGGG 909 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || ||||| |||||| || || | ||| || |||| |||||| Sbjct 908 GAATACCCTCTTTGTCCTGAATCTTTGCCTTTACATTCTCGATGGTGTCACTTGGCTCCA 849 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||||||||||||||||||| || ||||| || || |||||||| Sbjct 848 CCTCGAGAGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATTTT 797 >seq159113 Length=23055 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| || | |||||| || || || ||||| ||||| | Sbjct 23013 CCACCACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTC 22954 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||||||||| || | ||||| ||||||||||| ||| Sbjct 22953 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22894 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| ||| || ||| || | ||| || |||| ||||| | Sbjct 22893 ATGCCCTCTTTGTCCTGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACT 22834 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || || ||||| || | || || || || || ||||| Sbjct 22833 TCGAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||| | |||||| || || || ||||| ||||| | Sbjct 22785 CCACCACGCAGACGCAGGACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCACTC 22726 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||||||||| || | ||||| ||||||||||| ||| Sbjct 22725 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22666 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| ||| || ||| || | ||| || |||| ||||| | Sbjct 22665 ATGCCCTCTTTGTCCTGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACT 22606 Query 21129 TCCACGGTAATGGTCTTGCC 21148 || | ||| || || || || Sbjct 22605 TCGAGGGTGATCGTTTTTCC 22586 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | | ||||| ||| | ||| || |||||||| || || ||||| Sbjct 22312 TTCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTCGC 22253 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | || || || ||||| || || | || || ||||||||||| || Sbjct 22252 TAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGGG 22193 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || ||||| |||||| || || | ||| || |||| |||||| Sbjct 22192 GAATACCCTCTTTGTCCTGAATCTTTGCCTTTACATTCTCGATTGTGTCACTTGGCTCCA 22133 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||||||||||||||||| | || ||||| || || |||||||| Sbjct 22132 CCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATTTT 22081 >seq94379 Length=7077 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || |||| | ||||| | || | ||||| ||||| || ||||| ||||| Sbjct 6908 TCCACCACGCAAGCGAAGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCT 6967 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 ||| || || | ||||||||||||||||| || | || || ||||||||||| || Sbjct 6968 CAGAGTACGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGG 7027 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCAC 21100 | |||||||||||| |||||| |||||| Sbjct 7028 AATGCCTTCCTTGTCCTGGATCTTGGCTTTCAC 7060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421289604070412