Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq159113 91.5 2e-13 >seq159113 Length=23055 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || ||||||||||| || | || |||| ||| | Sbjct 22787 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAAACTATCACCCTCGAAGTTGAGCCAAGT 22846 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| ||||| || || ||||| || || || || || || Sbjct 22847 GACACGATCGAAAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 22906 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| || || || ||||| | |||||| | || || | || || || Sbjct 22907 CAGAGGCTTATCTTCGCCGGCAAACAGCTGGAGGATGGACGTACCCTGAGCGACTACAAC 22966 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||| ||| | || |||| | ||| | || |||||||| Sbjct 22967 ATCCAGAAAGAATCCACTCTTCACCTGGTCCTGCGTCTGCGTGGTGGTAT 23016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753676835017600