Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq88483 136 3e-27 seq176294 132 4e-26 seq159113 127 2e-24 seq26467 122 8e-23 seq166919 102 7e-17 seq18922 87.8 2e-12 seq60558 86.0 5e-12 seq44860 86.0 5e-12 >seq88483 Length=20907 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | |||||||| || || |||||||| ||||||| ||| || |||||| Sbjct 439 ACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCC 498 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| |||| || | |||||| |||||||| || || |||||||| Sbjct 499 AGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGG 558 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||||| ||| || || |||||||||| || | || || Sbjct 559 ATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTCTTT 618 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| ||||||||||||||| Sbjct 619 CCAGTAAGTGTTTTCACAAAAATCTGCATG 648 >seq176294 Length=1487 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||||||||| || | ||||| || ||||| |||||||| ||||| | |||||| ||| Sbjct 1012 CAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTAAGAGTGCGACCATC 953 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || |||||||||||| |||| || | |||||| || || || || ||||| ||||| Sbjct 952 TTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGGGGAATACCCTCTTTGTC 893 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| ||| || || | |||| |||||| | ||| ||||||| || | || Sbjct 892 CTGAATCTTTGCCTTTACATTCTCGATGGTGTCACTTGGCTCCACCTCGAGAGTAATGGT 833 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || || |||||||| Sbjct 832 CTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 800 >seq159113 Length=23055 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||||||||| || | ||||| || ||||| || ||||| ||||| | |||||| ||| Sbjct 22296 CAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTAAGAGTGCGACCATC 22237 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || |||||||||||| |||| || | |||||| || || || || ||||| ||||| Sbjct 22236 TTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGGGGAATACCCTCTTTGTC 22177 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| ||| || || | |||| ||||| | ||| ||||||| || | || Sbjct 22176 CTGAATCTTTGCCTTTACATTCTCGATTGTGTCACTTGGCTCCACCTCGAGAGTAATGGT 22117 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||||| || || || || |||||||| Sbjct 22116 CTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 22084 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || || ||||| || |||||||| ||||||| || || |||||| Sbjct 22995 ACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGTCCATCCTCC 22936 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| |||| || | |||||| || || || |||||||| ||||| Sbjct 22935 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGG 22876 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | ||||| ||||| | ||| || |||| ||| | |||||| Sbjct 22875 ATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACTTCGAGGGTGATAGTTTTG 22816 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || ||||||||||| Sbjct 22815 CCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 >seq26467 Length=1226 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | |||||||| || || |||||||| ||||||| ||| || ||||| Sbjct 792 ACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCCTCC 733 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| | || || | |||||| |||||||| || || |||||||| Sbjct 732 AGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGG 673 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||| || || |||||||||| || | || || Sbjct 672 ATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTCTTT 613 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| ||||||||||||||| Sbjct 612 CCAGTAAGTGTTTTCACAAAAATCTGCATG 583 >seq166919 Length=61529 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || || ||||| || |||||| | | ||||| || || ||| || Sbjct 59157 ACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGAAGTAGCTCAGGGTACGTCCATCTTCC 59098 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| |||| || | ||||||||| || || |||||||| |||| Sbjct 59097 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCTCTGTCCTGG 59038 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | |||| ||||| | ||| || || | || | |||||| Sbjct 59037 ATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAACTTCAAGAGTGATAGTTTTG 58978 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||| ||||||||||| Sbjct 58977 CCAGTGAGGGTCTTTACGAAAATCTGCAT 58949 >seq18922 Length=6667 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 45221 GAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAG 45280 |||||||||||||| || ||| | || |||||| | ||||||||||| || ||||| ||| Sbjct 4344 GAGAACCCATTCGACTTCATGGAAAACATTTCGCTCGAGGGCAAAACGAACTTTTTCGAG 4403 Query 45281 AAACGCGTCGGCGAATACAAG 45301 || || |||||||||||| || Sbjct 4404 AAGCGTGTCGGCGAATACCAG 4424 >seq60558 Length=5495 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 133847 GCAATACTGGACGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAtttttttG 133906 || ||||| || ||||| | ||| ||||||||||| |||||||||||||| || | ||| Sbjct 3762 GCTATACTCCACAATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCCCAAGTTCTGTTG 3703 Query 133907 ATTGCTAAAGTTATTGCAATGATCCTTGTATAGCATGTACGGCCCGCCGGTTTCGACGTT 133966 ||||| ||||| |||||||| ||||| || ||| ||| ||||| || | Sbjct 3702 GTTGCTCTTCCGGTTGCAGGCGTCCTTGTACAGCATATAGGGCGTGCCTGTTTCTACTTG 3643 Query 133967 GGTCTCGACGAT 133978 || ||||| ||| Sbjct 3642 GGCCTCGATGAT 3631 >seq44860 Length=53707 Score = 86.0 bits (94), Expect = 5e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 132949 TCTCCCACGCGTAAAAGTGTATGCTCGACACCACCGAGTAAGTGGGTTCGGCGACAAATA 133008 ||| ||||||| | ||||| ||||||| || ||| |||| ||||| | | Sbjct 7192 TCTTCCACGCGAAGAAGTGCATGCTCGTCAATTTGCCGTAGTTGGGCTCGGCAATGTGAA 7133 Query 133009 AATTCAGCGATTGACTCTGATCTATGAAAGGAGCACGGTCGGCGGCCATGTTTATTATAC 133068 ||| ||||| ||||||||||| ||| | || |||||||| ||||| || || || Sbjct 7132 TATTGAGCGACTGACTCTGATCAATGTACACGGCCCGGTCGGCCGCCATCTTAATGATGG 7073 Query 133069 ACTTTGATTTGATCTCCCATGCCGTCTTGAAGAGATTCTTGACATGCTGTGGTATTTCGT 133128 |||| | |||||||| | || ||| |||||| ||||| | ||| || || |||| Sbjct 7072 TCTTTTGTGAAATCTCCCACACAGTTTTGTAGAGATCCTTGAGCTCCTGGGGAATCTCGT 7013 Query 133129 CAATGTTCTG 133138 | || ||||| Sbjct 7012 CGATTTTCTG 7003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432834234161644