Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq177713 122 6e-23 seq159113 116 2e-21 seq44755 113 3e-20 seq26467 113 3e-20 seq88483 107 1e-18 seq94379 86.0 4e-12 seq176294 84.2 1e-11 >seq177713 Length=14691 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||||| | ||||| ||||| | ||| ||| ||||| |||||||||||| | Sbjct 1555 CCACCGCGCAAGCGAAGCACAAGGTGGAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTC 1496 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| ||| ||||| ||||| || |||| |||||||||| || Sbjct 1495 AGAGTACGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 1436 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | |||| ||| | | || || Sbjct 1435 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAACT 1376 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 1375 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1329 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||||| | ||||| ||||| | || ||||||||| |||||||||||| | Sbjct 1783 CCACCGCGCAAGCGAAGCACAAGGTGGAGCGTGGATTCTTTCTGGATGTTGTAGTCGCTC 1724 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| ||| ||||| ||||| || |||| |||||||||| || Sbjct 1723 AGAGTACGGCCATCCTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 1664 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | |||| ||| | | || || Sbjct 1663 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAACT 1604 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 1603 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1557 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||||| | ||||| ||||| | || ||| ||||| |||||||||||| | Sbjct 316 CCACCGCGCAAGCGAAGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTC 257 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| ||||| || |||| |||||||||| || Sbjct 256 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 197 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||| || ||||| | | | |||| ||| | | || || Sbjct 196 ATGCCTTCCTTGTCCTGGATC-TTGGCTTTCACGTTTTCGATCGTGTCGCTGGGCTCAAC 138 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| || || || ||||||||||||||||| Sbjct 137 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 90 Score = 82.4 bits (90), Expect = 5e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 34209 TGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCT 34268 ||||||||||| ||| ||| | || |||| ||| ||||| ||||| || |||| || Sbjct 498 TGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCT 439 Query 34269 GCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAA 34327 |||||||| || | || ||||| || ||| || ||||| | | | |||| Sbjct 438 GCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATC-TTGGCTTTCACGTTCTCGATCGTG 380 Query 34328 TCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGC 34387 ||| | | || || |||| |||||||| ||||| || || || || || ||||||||| Sbjct 379 TCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGC 320 Query 34388 AT 34389 || Sbjct 319 AT 318 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||||| | ||||| ||||| | || ||| ||||| |||||||||||| | Sbjct 1327 CCACCGCGCAAGCGAAGCACAAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTC 1268 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| ||||| || |||| |||||||||| || Sbjct 1267 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 1208 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | | | |||| ||| | | || || Sbjct 1207 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTGGGCTCAACT 1148 Query 34343 TCCACCGTGATGGTTTTGCC 34362 |||| |||||||| ||||| Sbjct 1147 TCCAGGGTGATGGTCTTGCC 1128 >seq159113 Length=23055 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||||||| | ||| ||||||||| |||||||||||| | Sbjct 23013 CCACCACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTC 22954 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| ||||| || |||| ||||||||| ||| Sbjct 22953 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22894 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||| ||||| || ||| ||||| | | | |||| || | | || || Sbjct 22893 ATGCCCTCTTTGTCCTGGAT-TTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAAC 22835 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| |||||||| ||||| || ||||| || |||||||| Sbjct 22834 TTCGAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| ||||| || | ||| ||||||||| ||||||||||| | Sbjct 22785 CCACCACGCAGACGCAGGACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCACTC 22726 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| ||||| || |||| ||||||||| ||| Sbjct 22725 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22666 Query 34283 ACGCTCTCCTTGTC 34296 | || ||| ||||| Sbjct 22665 ATGCCCTCTTTGTC 22652 >seq44755 Length=507 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||||| | || || ||||| | || ||| ||||| |||||||||||| | Sbjct 198 CCACCGCGCAAGCGAAGAACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTC 257 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| ||||| || |||| |||||||||| || Sbjct 258 AGAGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 317 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | || | ||| | | || || Sbjct 318 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACT 377 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| || || |||||||| ||||||||||| Sbjct 378 TCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 424 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||||||| ||| |||| | || |||| ||| ||||| ||||| Sbjct 5 TTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCGAA 64 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || |||| |||||||||| || | || ||||| || ||||| ||| | | Sbjct 65 GATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 124 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | |||| ||| | | || || |||| |||||||| ||||| || || || ||||| Sbjct 125 CTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 184 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 185 GAAGATCTGCAT 196 >seq26467 Length=1226 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || |||| || | |||| || ||||| |||||||||||| | Sbjct 810 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 751 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| ||| ||||| ||||| || |||| |||||||||| || Sbjct 750 AGAGTACGACCGTCCTCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGG 691 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | || | || | ||| | | |||||| Sbjct 690 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGACC 631 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || || || ||||||||||| |||||||| Sbjct 630 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 584 >seq88483 Length=20907 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || |||| || | |||| || ||||| |||||||||||| | Sbjct 421 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 480 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| ||||| || |||| |||||||||| || Sbjct 481 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 540 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | || | || | ||| | | |||||| Sbjct 541 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGACC 600 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || || || ||||||||||| |||||||| Sbjct 601 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 647 >seq94379 Length=7077 Score = 86.0 bits (94), Expect = 4e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 ||||| || |||| | ||||| ||||| | || ||| ||||| |||||||||||| Sbjct 6906 AATCCACCACGCAAGCGAAGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCG 6965 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 ||| |||| | || |||| ||| ||||| ||||| || |||| |||||||||| Sbjct 6966 CTCAGAGTACGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGA 7025 Query 34280 GGCACGCTCTCCTTGTC 34296 || | || |||||||| Sbjct 7026 GGAATGCCTTCCTTGTC 7042 >seq176294 Length=1487 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| ||||| || | || ||||||||| |||||||||||| | Sbjct 1464 CCACCACGCAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGCTC 1405 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || |||| ||||||||| ||| Sbjct 1404 AGGGTACGTCCATCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 1345 Query 34283 ACGCTCTCCTTGTC 34296 | || ||| ||||| Sbjct 1344 ATGCCCTCTTTGTC 1331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322330158741920