Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq159113 93.3 3e-14 seq177713 82.4 6e-11 >seq159113 Length=23055 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||| || |||||||| || |||||||||||| || || | ||| Sbjct 22998 AGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGTCCATCC 22939 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| |||||||| || ||||||| || || || || ||| | ||| || || || Sbjct 22938 TCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCC 22879 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 |||| | || ||||| | | | | ||||||| ||||| ||| | |||||| | Sbjct 22878 TGGATTT-TGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACTTCGAGGGTGATAGT 22820 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||| || | || || || ||||| ||||| Sbjct 22819 TTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 >seq177713 Length=14691 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | ||| || || ||||| || || |||||||||||| || || || ||| Sbjct 302 AAGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATC 243 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 |||| |||||||| || |||| || || || || || || | ||||||||| || Sbjct 242 CTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 183 Query 18233 GGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 || | | || || || | | | | ||||| | |||||| ||| | ||||||| Sbjct 182 CTGGATCT-TGGCTTTCACGTTTTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGG 124 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||||| |||| || || ||||| || ||||| Sbjct 123 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378472946395215