Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq88483 84.2 2e-11 >seq88483 Length=20907 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24829 ATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCG 24888 ||||||||||| ||||| ||||| | || || || || || || |||| |||||| | Sbjct 650 ATCATGCAGATTTTTGTGAAAACACTTACTGGAAAGACTATCACACTCGAGGTCGAACCC 591 Query 24889 AGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948 || || | | |||| ||| |||| || || | || ||||| | || ||| Sbjct 590 AGTGATACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCCGAC 531 Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008 ||||| | | || | || |||||||| ||||| ||| ||| ||| ||| ||| Sbjct 530 CAGCAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACTCTGAGCGACTAC 471 Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 | ||| ||||| ||| | || || ||||| || | || ||||||| ||| Sbjct 470 AACATCCAGAAGGAGTCTACTCTGCATTTGGTCCTTCGCCTGCGCGGTGGT 420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417343486041440