Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11]
188,407 sequences; 1,026,046,400 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq124561 113 4e-20
seq9938 93.3 4e-14
>seq124561
Length=8077
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563
|| || |||||||| || || ||||| || || ||||| ||||| | || ||| ||
Sbjct 6372 CCAGTCGACCCGAACCCACCCGCGCCCCTCTCTGTATCATCCAGAGTGGGCAGCTCCTCG 6313
Query 5564 ACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACC 5623
| |||||| || |||||||| ||||||||||| || ||||| || |||| |||
Sbjct 6312 AGATCGGGCAAATAGATTCGCTCGCATATCAGCTGCGCAATGCGGTCTCCTTTCTTCACC 6253
Query 5624 TCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCG 5683
|||| || | | |||||| || || || | |||||||||||||| |||||||| |
Sbjct 6252 GCGAATTCCTCGGTGCCGAAATTAAAGAGAATAACGCCCACGTTGCCACGGTAGTCCTGG 6193
Query 5684 TCTATCACGCCCGCGCC 5700
|| || || || || ||
Sbjct 6192 TCGATGACACCGGCACC 6176
>seq9938
Length=13986
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 5582 CGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCG 5641
|||||||| ||||||||||| || ||||| || |||| ||| |||| || | | ||||
Sbjct 27 CGCTCGCATATCAGCTGCGCAATGCGGTCTCCTTTCTTCACCGCGAATTCCTCGGTGCCG 86
Query 5642 AAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700
|| || || || | ||||||||||||||| |||||||| ||| || || || || ||
Sbjct 87 AAATTAAAGAGAATCACGCCCACGTTGCCACGGTAGTCTTGGTCGATGACACCGGCACC 145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429066904651784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |