Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq163113 84.2 1e-11 seq156322 84.2 1e-11 seq28707 84.2 1e-11 >seq163113 Length=1298 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 || ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 410 GGCTCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 356 >seq156322 Length=3910 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 || |||||||| |||| |||||||||||||||||||||||| ||||||||||||| Sbjct 1159 GGCTCGAACCTACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 1105 >seq28707 Length=712 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 || ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 276 GGCTCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 330 Lambda K H 0.642 0.411 0.926 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260890761209932