Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq154763 118 2e-22 >seq154763 Length=5016 Score = 118 bits (130), Expect = 2e-22 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 16462 TAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAA 16521 || |||||| || |||||||||||||| ||||||||||| ||||| |||||||| ||||| Sbjct 4892 TATCATCCAGGGTATCACCAAGCCAGCCATCCGTCGTCTCGCTCGCCGTGGTGGTGTCAA 4951 Query 16522 GCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGAC 16581 |||| |||||||| | |||| ||||| | || | ||| ||||| ||||||| ||| Sbjct 4952 GCGTATCTCTGGACTCATCTACGAAGAAACCCGAGGTGTGCTGAAGGTCTTCCTTGAGAA 5011 Query 16582 CGT 16584 ||| Sbjct 5012 CGT 5014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78902938161051