Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq177713 107 2e-18 seq44755 104 2e-17 seq159113 96.9 3e-15 seq26467 93.3 3e-14 seq88483 87.8 1e-12 >seq177713 Length=14691 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||| ||||| || |||||||||||| || || | ||||||| ||| Sbjct 292 TGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGT 233 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || |||| ||| ||||| ||| | ||| || ||||| || || Sbjct 232 TTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTG 173 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| ||||| | | | ||||||| |||||| ||||| ||||||||| || || | Sbjct 172 GCT--TTCACGTTTTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAG 115 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || ||||| |||||||| Sbjct 114 TCAGGGTCTTCACAAAGATCTGCAT 90 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| || ||||| || |||||||||||| || || | | ||||||| ||| Sbjct 1531 TGGAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGT 1472 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || |||| ||| ||||| ||| | ||| || ||||| || || Sbjct 1471 TTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTG 1412 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | ||||||| ||||| ||||| ||||||||| || || | Sbjct 1411 GC--CTTCACGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAG 1354 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || |||||||| Sbjct 1353 TCAGGGTCTTCACGAAGATCTGCAT 1329 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||| || || || |||||||||||| || || | | ||||||| ||| Sbjct 1759 TGGAGCGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGT 1700 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || |||| ||| ||||| ||| | ||| || ||||| || || Sbjct 1699 TTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTG 1640 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | ||||||| ||||| ||||| ||||||||| || || | Sbjct 1639 GC--CTTCACGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAG 1582 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || |||||||| Sbjct 1581 TCAGGGTCTTCACGAAGATCTGCAT 1557 >seq44755 Length=507 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || |||||||| ||||| || |||||||||||| || || | ||||||| || Sbjct 222 TGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGC 281 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || |||| ||| ||||| ||| | ||| || ||||| || || Sbjct 282 TTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTG 341 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | ||||||| |||||| ||||| ||||||||| || || | Sbjct 342 GC--CTTCACGTTCTCGATGGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAG 399 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || |||||||| Sbjct 400 TCAGGGTTTTCACGAAGATCTGCAT 424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 16740 TGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCG 16799 |||| ||||| || |||||||||||| || || | | ||||||| |||||||| | Sbjct 1 TGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAG 60 Query 16800 CATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTT 16857 | | || |||| ||| ||||| ||| | ||| || || || || || || ||| Sbjct 61 CGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGC--CTT 118 Query 16858 CACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGT 16917 ||| | | | ||||||| ||||| ||||| ||||||||| || || ||||| || Sbjct 119 CACGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGT 178 Query 16918 TTTGACAAAAATCTGCAT 16935 || || || |||||||| Sbjct 179 CTTCACGAAGATCTGCAT 196 >seq159113 Length=23055 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || || ||||| || || || |||||||||||| | Sbjct 23013 CCACCACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTC 22954 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| |||||||| || | ||||||| ||| ||||| || Sbjct 22953 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22894 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||||||| || || ||| || || | | | ||||| | ||||| Sbjct 22893 ATGCCCTCTTTGTCCTGGATTTTGGCT--TTGACGTTTTCGATCGTGTCACTTGGCTCAA 22836 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||| ||||| || || || || || || ||||||||||| Sbjct 22835 CTTCGAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 >seq26467 Length=1226 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || |||||||| || |||||||||||| || || ||||| Sbjct 795 AGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCC 736 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| |||||||| || | || |||| ||| ||||| ||| | || || ||||| Sbjct 735 TCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCC 676 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | || || | ||| || || | ||||| | Sbjct 675 TGGATCTTGGC--CTTCACATTCTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAG 618 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | ||||| || || ||||| |||||||||||||| Sbjct 617 TCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 584 >seq88483 Length=20907 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || |||||||| || |||||||||||| || || | ||| Sbjct 436 AGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCC 495 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| |||||||| || | || |||| ||| ||||| ||| | || || ||||| Sbjct 496 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCC 555 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | || || | ||| || || | ||||| | Sbjct 556 TGGATCTTGGC--CTTCACATTTTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAG 613 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | ||||| || || ||||| |||||||||||||| Sbjct 614 TCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404157832756930