Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq159113 105 6e-18 seq88483 105 6e-18 seq26467 105 6e-18 seq176294 102 7e-17 seq166919 100 2e-16 seq44860 91.5 1e-13 seq177713 89.7 4e-13 seq60558 87.8 2e-12 seq50026 84.2 2e-11 >seq159113 Length=23055 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || ||||| |||| || ||||| || | | Sbjct 22787 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAAACTATCACCCTCGAAGTTGAGCCAAGT 22846 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||||| ||||| || ||||| ||||| ||||| || || || Sbjct 22847 GACACGATCGAAAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 22906 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| || |||||||||||| | |||||| || ||| | ||| |||||| Sbjct 22907 CAGAGGCTTATCTTCGCCGGCAAACAGCTGGAGGATGGACGTACCCTGAGCGACTACAAC 22966 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||||||||| | || | || |||| |||| || ||| Sbjct 22967 ATCCAGAAAGAATCCACTCTTCACCTGGTCCTGCGTCTGCGTGGTGGT 23014 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 || |||||| |||| || ||||| || | | || || | || | ||||| ||| Sbjct 22586 GGAAAAACGATCACCCTCGAAGTTGAGCCAAGTGACACGATCGAAAACGTCAAAGCCAAA 22645 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || ||||| ||||| ||||| || || || || | ||||| || |||||||||||| Sbjct 22646 ATCCAGGACAAAGAGGGCATTCCCCCAGACCAGCAGAGGCTTATCTTCGCCGGCAAACAG 22705 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | |||||| || ||| | || |||||||| || ||||||||||| | ||| | Sbjct 22706 CTGGAGGATGGACGTACCCTGAGTGACTACAACATCCAGAAAGAATCCACTCTTCATCTG 22765 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || |||| |||| || ||| Sbjct 22766 GTCCTGCGTCTGCGTGGTGGT 22786 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || | ||||| || || | ||||| || ||||| | Sbjct 22081 AAAATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACTCTCGAGGTGGAGCCA 22140 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | || ||| ||||| ||||| ||||||||||| || || Sbjct 22141 AGTGACACAATCGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCCCCTGAC 22200 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || || || || ||||| | || ||| ||||| | ||| ||| Sbjct 22201 CAGCAGAGGCTAATCTTCGCTGGAAAACAACTTGAAGATGGTCGCACTCTTAGCGACTAC 22260 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || ||||| ||||| || | ||||| || ||||| Sbjct 22261 AATATCCAAAAGGAATCTACTCTTCATTTGGTGTTGCG 22298 >seq88483 Length=20907 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| | || || || || |||| || || || ||| ||| Sbjct 647 ATGCAGATTTTTGTGAAAACACTTACTGGAAAGACTATCACACTCGAGGTCGAACCCAGT 588 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || || || || |||||||| ||||| || ||||| || Sbjct 587 GATACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCCGACCAG 528 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || |||||||||||| | |||||| || || | ||| |||||| Sbjct 527 CAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACTCTGAGCGACTACAAC 468 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||||| || | || ||||||| ||| Sbjct 467 ATCCAGAAGGAGTCTACTCTGCATTTGGTCCTTCGCCTGCGCGGTGGT 420 >seq26467 Length=1226 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| | || || || || |||| || || || ||| ||| Sbjct 584 ATGCAGATTTTTGTGAAAACACTTACTGGAAAGACTATCACACTCGAGGTCGAACCCAGT 643 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || || || || |||||||| ||||| || ||||| || Sbjct 644 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCCGACCAG 703 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || ||||| |||||||||||| | ||||| || || | ||| |||||| Sbjct 704 CAGAGGCTGATATTCGCCGGCAAACAGCTGGAGGACGGTCGTACTCTGAGCGACTACAAC 763 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||||| || | || ||||||| ||| Sbjct 764 ATCCAGAAGGAGTCTACTCTGCATTTGGTCCTTCGCCTGCGCGGTGGT 811 >seq176294 Length=1487 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22246 GGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAA 22305 || |||||| |||| || ||||| || | | || || | || | ||||| ||| Sbjct 1265 GGAAAAACGATCACCCTCGAAGTCGAGCCAAGTGACACGATCGAAAACGTCAAAGCCAAA 1324 Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || ||||| ||||| ||||| || || || || | ||||| || |||||||| ||| Sbjct 1325 ATCCAGGACAAAGAGGGCATTCCCCCAGACCAGCAGAGGCTTATCTTCGCCGGCAAGCAG 1384 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | |||||| || ||| | ||| |||||||| || |||||||||||| | ||| | Sbjct 1385 CTTGAGGATGGACGTACCCTGAGCGACTACAACATCCAGAAAGAATCCACCCTTCATCTG 1444 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 || |||| |||| || ||| Sbjct 1445 GTCCTGCGTCTGCGTGGTGGT 1465 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || || ||||||| || || | ||||| || ||||| | Sbjct 797 AAAATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACTCTCGAGGTGGAGCCA 856 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | || || | || ||| ||||| ||||| ||||||||||| || || Sbjct 857 AGTGACACCATCGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCCCCTGAC 916 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || || || || ||||| | || ||| ||||| | ||| ||| Sbjct 917 CAGCAGAGACTGATCTTCGCTGGAAAACAACTTGAAGATGGTCGCACTCTTAGCGACTAC 976 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| ||||| ||||| || | ||||| || ||||| Sbjct 977 AACATCCAAAAGGAATCTACTCTTCATTTGGTGTTGCG 1014 >seq166919 Length=61529 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || ||||| ||||||||||||| || | | Sbjct 58949 ATGCAGATTTTCGTAAAGACCCTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT 59008 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||||| ||||| || |||| ||||| ||||| || ||||| Sbjct 59009 GACACGATCGAGAACGTCAAAGCCAAAATCCAGGACAGAGAGGGCATTCCCCCAGATCAG 59068 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| || |||||||||||| | || ||| || ||| | | | | |||| Sbjct 59069 CAGAGGCTTATCTTCGCCGGCAAACAGCTGGAAGATGGACGTACCCTGAGCTACTTCAAC 59128 Query 22399 ATTCAAAAAGAATCCACC 22416 || || |||||||||||| Sbjct 59129 ATCCAGAAAGAATCCACC 59146 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || ||||| ||||||||||||| || | | Sbjct 59177 ATGCAGATTTTCGTGAAGACCGTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT 59236 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 59237 GACACGATCGAGAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGATCAG 59296 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 || | ||||| || |||||||| ||| | |||||| Sbjct 59297 CAGAGGCTTATCTTCGCCGGCAAGCAGCTGGAGGAT 59332 >seq44860 Length=53707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795 || ||||| ||||| || | |||||| || || || ||||||||||| | || ||| Sbjct 4474 CTATACTCCACAATCTCCGTGCACAAGTTGCTGCACTTGATGGTGCCCAAGTTCTGTTGG 4415 Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855 || || ||| |||||| || || ||||| | |||||| || || || || ||||||||| Sbjct 4414 TTGCTCTTCCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGAGTTCCGGTCTCGACTTGC 4355 Query 129856 GTTTCGACAATGG 129868 | |||| ||||| Sbjct 4354 GCCTCGATAATGG 4342 >seq177713 Length=14691 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || ||||| || ||| | Sbjct 90 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGC 149 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | ||| || || || |||||||| || || || ||||| || Sbjct 150 GACACGATCGAAAACGTGAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 209 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || |||||||||||| | |||||| || || | ||| |||||| Sbjct 210 CAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACTCTGAGCGACTACAAC 269 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || |||||||| | || | || | || |||||||| || Sbjct 270 ATCCAGAAGGAATCCACGCTCCACCTTGTGCTTCGCTTGCGCGGTGG 316 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || ||||| || | | | Sbjct 1557 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCAAGC 1616 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || || || |||||||| || || || ||||| || Sbjct 1617 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 1676 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || ||||||||| | |||||| ||| || | ||| |||||| Sbjct 1677 CAGAGGCTGATCTTCGCTGGCAAACAGCTGGAGGATGGCCGTACTCTGAGCGACTACAAC 1736 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||||||||| | || | || | || |||||||| ||| Sbjct 1737 ATCCAGAAAGAATCCACGCTCCACCTTGTGCTTCGCTTGCGCGGTGGT 1784 >seq60558 Length=5495 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795 || ||||| ||||| || | ||||| || || || ||||||||||| | || ||| Sbjct 3761 CTATACTCCACAATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCCCAAGTTCTGTTGG 3702 Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855 || || ||| |||||| || || ||||||| ||| || |||||||| ||||| ||||| Sbjct 3701 TTGCTCTTCCGGTTGCAGGCGTCCTTGTACAGCATATAGGGCGTGCCTGTTTCTACTTGG 3642 Query 129856 GTTTCGACAATGG 129868 | |||| |||| Sbjct 3641 GCCTCGATGATGG 3629 >seq50026 Length=5431 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || ||||| ||||||||||||| || | | Sbjct 677 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT 736 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||||| ||||| || ||||| ||||| ||||| || || || Sbjct 737 GACACGATCGAGAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 796 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 || | ||||| || |||||||| ||| | |||||| Sbjct 797 CAGAGGCTTATCTTCGCCGGCAAGCAGCTGGAGGAT 832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418764216237955