Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq159113 131 2e-25 seq44755 123 2e-23 seq176294 122 9e-23 seq177713 114 1e-20 seq26467 105 7e-18 seq166919 100 3e-16 seq88483 96.9 3e-15 seq94379 91.5 1e-13 seq50026 86.0 6e-12 >seq159113 Length=23055 Score = 131 bits (144), Expect = 2e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACG-GTGCGCGCGTCTT 64292 ||| | ||||| || ||||| ||||| || ||||| || || | | ||||| | |||| Sbjct 22293 CACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTC-GCTAAGAGTGCGACCATCTT 22235 Query 64293 CAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTT 64352 |||| || || || || | || |||| ||||||||| || ||||| || ||||| || | Sbjct 22234 CAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGGGGAATACCCTCTTTGTCCT 22175 Query 64353 GTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412 | || ||| ||||||| ||| | ||| |||| | ||||| || | ||| | ||||| Sbjct 22174 GAATCTTTGCCTTTACATTCTCGATTGTGTCACTTGGCTCCACCTCGAGAGTAATGGTCT 22115 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||||||| || || ||||| || |||||||| Sbjct 22114 TGCCGGTCAGGGTCTTGACGAAGATCTGCATTTT 22081 >seq44755 Length=507 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||| | ||| || || || | ||| ||||| || || |||||||| || Sbjct 197 ACCACCGCGCAAGCGAAGAACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCT 256 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || |||||||||||||| | || |||| ||||||||||||||| Sbjct 257 CAGAGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGG 316 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| || ||| | || || | || || || Sbjct 317 GATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAAC 376 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| |||| ||||| ||||| || ||||| Sbjct 377 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 424 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 64250 GATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCA 64309 ||||| || || |||||||| || | || || | || || ||||| ||||| || Sbjct 3 GATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCG 62 Query 64310 TAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACA 64369 | || |||| ||||||||||||||| || ||||| || || || || || ||| || Sbjct 63 AAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACG 122 Query 64370 ACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTT 64429 ||| | || || | | || ||||| | || | ||||||||| |||| || || Sbjct 123 TTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 182 Query 64430 ACGAAAATTTGCAT 64443 ||||| || ||||| Sbjct 183 ACGAAGATCTGCAT 196 >seq176294 Length=1487 Score = 122 bits (134), Expect = 9e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACG-GTGCGCGCGTCTT 64292 ||| | ||||| || ||||| ||||| |||||||| || || | | ||||| | |||| Sbjct 1009 CACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTC-GCTAAGAGTGCGACCATCTT 951 Query 64293 CAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTT 64352 |||| || || || || | || || | ||||||||| || ||||| || ||||| || | Sbjct 950 CAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGGGGAATACCCTCTTTGTCCT 891 Query 64353 GTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412 | || ||| ||||||| ||| | || |||| | ||||| || | ||| | ||||| Sbjct 890 GAATCTTTGCCTTTACATTCTCGATGGTGTCACTTGGCTCCACCTCGAGAGTAATGGTCT 831 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||||| | || || ||||| || |||||||| Sbjct 830 TGCCGGTTAGGGTCTTGACGAAGATCTGCATTTT 797 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||||| || |||||||| || |||||||| || Sbjct 1465 ACCACCACGCAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGCT 1406 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || ||||||||||||||||| | || |||| ||||||||| || || Sbjct 1405 CAGGGTACGTCCATCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGG 1346 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| || ||||| || || ||||| Sbjct 1345 AATGCCCTCTTTGTCCTGGATTTT 1322 >seq177713 Length=14691 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||| | |||||| || || | ||| ||||| || || |||||||| || Sbjct 1556 ACCACCGCGCAAGCGAAGCACAAGGTGGAGCGTAGATTCCTTCTGGATGTTGTAGTCGCT 1497 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || ||||| |||||||| | || |||| ||||||||||||||| Sbjct 1496 CAGAGTACGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGG 1437 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| || ||| | || || | | || || Sbjct 1436 GATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAAC 1377 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| |||| || || ||||| || ||||| Sbjct 1376 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1329 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||| | |||||| || || | ||| |||||||| || |||||||| || Sbjct 1784 ACCACCGCGCAAGCGAAGCACAAGGTGGAGCGTGGATTCTTTCTGGATGTTGTAGTCGCT 1725 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || ||||| ||||| || | || |||| ||||||||||||||| Sbjct 1724 CAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGG 1665 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| || ||| | || || | | || || Sbjct 1664 GATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAAC 1605 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| |||| || || ||||| || ||||| Sbjct 1604 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1557 Score = 111 bits (122), Expect = 2e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||| | |||||| || |||| ||||||||| || || |||||||| || Sbjct 1328 ACCACCGCGCAAGCGAAGCACAAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCT 1269 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || ||||| |||||||| | || |||| ||||||||||||||| Sbjct 1268 CAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGG 1209 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| || ||| | || || | || || || Sbjct 1208 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTGGGCTCAAC 1149 Query 64396 TTCTACAGTTACGGTCTTGCC 64416 ||| | || | ||||||||| Sbjct 1148 TTCCAGGGTGATGGTCTTGCC 1128 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || |||||||| | |||||| || || | ||| ||||| || || |||||||| || Sbjct 316 CCACCGCGCAAGCGAAGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTC 257 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || || ||||| |||||||| | || |||| ||||||||||||||| Sbjct 256 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 197 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || | | || ||||| || || | || || | || || || Sbjct 196 ATGCCTTCCTTGTCCTGGA-TCTTGGCTTTCACGTTTTCGATCGTGTCGCTGGGCTCAAC 138 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| |||| || || || || || ||||| Sbjct 137 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 90 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || ||||| | |||||| || || | ||||||||| || || |||||||| || Sbjct 2117 CCACCACGCAAGCGAAGCACAAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTC 2058 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || || ||||| |||||||| | || |||| ||||||||||||||| Sbjct 2057 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 1998 Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359 || ||||| || || || || || Sbjct 1997 ATGCCTTCCTTATCCTGGATCTT 1975 >seq26467 Length=1226 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||| || | ||| | || || || || || |||||||| || Sbjct 811 ACCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 752 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || ||||| |||||||| | || |||| ||||||||||||||| Sbjct 751 CAGAGTACGACCGTCCTCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGG 692 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| ||| ||| | ||||||| || || || Sbjct 691 GATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGAC 632 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || || | ||||| || ||||| ||||| Sbjct 631 CTCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 584 >seq166919 Length=61529 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || |||| || |||||||| || |||||| | | Sbjct 59176 ACCACCACGCAGACGAAGGACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGAAGTAGCT 59117 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | ||||| ||||| |||||||| | || |||| |||||| || || || Sbjct 59116 CAGGGTACGTCCATCTTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGG 59057 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| || ||| | || || ||||| ||||| || ||| | || |||| | || | Sbjct 59056 AATGCCCTCTCTGTCCTGGATTTTG-GCTTTGACGTTCTCGATCGTGTCACTTGGCTCAA 58998 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | ||| | || ||||| || | || ||||||||||| ||||| Sbjct 58997 CTTCAAGAGTGATAGTTTTGCCAGTGAGGGTCTTTACGAAAATCTGCAT 58949 >seq88483 Length=20907 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||| || | ||| | || || || || || |||||||| || Sbjct 420 ACCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 479 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || ||||| |||||||| | || |||| ||||||||||||||| Sbjct 480 CAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGG 539 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| ||| || | ||||||| || || || Sbjct 540 GATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGAC 599 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || || | ||||| || ||||| ||||| Sbjct 600 CTCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCAT 647 >seq94379 Length=7077 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || ||||| | |||||| || || | ||| ||||| || || |||||||| || Sbjct 6909 CCACCACGCAAGCGAAGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTC 6968 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || || ||||| |||||||| | || |||| |||||||||||||||| Sbjct 6969 AGAGTACGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGA 7028 Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359 || ||||| || || || || || Sbjct 7029 ATGCCTTCCTTGTCCTGGATCTT 7051 >seq50026 Length=5431 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || || |||||||||||||| | || |||| ||||||||| || ||||| || ||||| Sbjct 831 TCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTG 772 Query 64349 TCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || | |||| ||||| || ||| | || |||| | || ||||| | ||| | Sbjct 771 TCCTGGA-TTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAACTTCAAGAGTGAT 713 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| || | || || |||||||| ||||| Sbjct 712 AGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498468092777080