Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq176294 136 4e-27 seq88483 132 5e-26 seq159113 131 2e-25 seq26467 118 1e-21 seq60558 109 5e-19 seq44860 109 5e-19 seq18922 104 2e-17 seq166919 95.1 1e-14 seq172076 89.7 5e-13 seq179804 87.8 2e-12 >seq176294 Length=1487 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||||||||||||| | ||||| || ||||| || ||||| |||| Sbjct 1027 TCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGCT 968 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || || |||||||||||| |||||| || |||||| || || || Sbjct 967 AAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGGGG 908 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||| |||||| ||| | | || ||| | | |||| |||||| | ||| | Sbjct 907 AATACCCTCTTTGTCC-TGAATCTTTGCCTTTACATTCTCGATGGTGTCACTTGGCTCCA 849 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | || |||||||| || || || || || |||||||| Sbjct 848 CCTCGAGAGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 800 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||| ||| | || || ||||| || || ||||| |||| | Sbjct 1464 CCACCACGCAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGCTC 1405 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || ||| |||| | | |||||| || || || Sbjct 1404 AGGGTACGTCCATCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 1345 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||| |||||| |||||| |||| | ||||| ||||| | ||||||| Sbjct 1344 ATGCCCTCTTTGTCCTGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCGACT 1285 Query 127067 TCGACGGTCACCGTTTTGCC 127086 |||| ||| | |||||| || Sbjct 1284 TCGAGGGTGATCGTTTTTCC 1265 >seq88483 Length=20907 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||||||| | |||||||| || || || ||||| |||| | Sbjct 421 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 480 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || |||||||| || ||| |||||| | |||||| |||||||| Sbjct 481 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 540 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||| | | ||||| ||| || | ||||| Sbjct 541 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGACC 600 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | || || || || || ||||| ||||||||||||||| Sbjct 601 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCATG 648 >seq159113 Length=23055 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||||||||||||| | ||||| || ||||| |||||||| |||| Sbjct 22311 TCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCT 22252 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || || |||||||||||| |||| | | |||||| || || || Sbjct 22251 AAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGGGG 22192 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||| |||||| ||| | | ||| || | | |||| ||||| | ||| | Sbjct 22191 AATACCCTCTTTGTCC-TGAATCTTTGCCTTTACATTCTCGATTGTGTCACTTGGCTCCA 22133 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | || ||||||||||| || || || || |||||||| Sbjct 22132 CCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 22084 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||| || | || || ||||| || || ||||| |||| | Sbjct 23013 CCACCACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTC 22954 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || |||||||| || ||| |||| | | |||||| || || || Sbjct 22953 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22894 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||| |||||| |||||| |||| | ||||| ||||| | ||| ||| Sbjct 22893 ATGCCCTCTTTGTCCTGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACT 22834 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | |||||||| || || || || || ||||||||||| Sbjct 22833 TCGAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 >seq26467 Length=1226 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||||||| | |||||||| || || || ||||| |||| | Sbjct 810 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 751 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || |||||||| || ||| | |||| | |||||| |||||||| Sbjct 750 AGAGTACGACCGTCCTCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGG 691 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||| | | |||| ||| || | ||||| Sbjct 690 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGACC 631 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | || || || || || ||||| ||||||||||||||| Sbjct 630 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCATG 583 >seq60558 Length=5495 Score = 109 bits (120), Expect = 5e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 146676 GCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttG 146735 || ||||| ||||||||| | ||| |||||||||||||||||| ||||||| || | ||| Sbjct 3762 GCTATACTCCACAATCTCCGTGCACAGGTTGCTGCACTTGATGGTGCCCAAGTTCTGTTG 3703 Query 146736 GTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATT 146795 ||| || | |||||||| ||||||||| ||||| || || || ||||| || | Sbjct 3702 GTTGCTCTTCCGGTTGCAGGCGTCCTTGTACAGCATATAGGGCGTGCCTGTTTCTACTTG 3643 Query 146796 GGTCTCGACGATG 146808 || ||||| |||| Sbjct 3642 GGCCTCGATGATG 3630 >seq44860 Length=53707 Score = 109 bits (120), Expect = 5e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 146676 GCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttG 146735 || ||||| ||||||||| | ||| | |||||||||||||||| ||||||| || | ||| Sbjct 4475 GCTATACTCCACAATCTCCGTGCACAAGTTGCTGCACTTGATGGTGCCCAAGTTCTGTTG 4416 Query 146736 GTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATT 146795 ||| || | |||||||| |||||||||||||||||| || ||||| ||||| | Sbjct 4415 GTTGCTCTTCCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGAGTTCCGGTCTCGACTTG 4356 Query 146796 GGTCTCGA 146803 | ||||| Sbjct 4355 CGCCTCGA 4348 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 145790 TCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGGTTCGGCGACAAA 145847 ||| ||||| | | ||||| ||||||| || | ||| || |||| ||||| | Sbjct 7192 TCTTCCACGCGAAGAAGTGCATGCTCGTCAATTTGCCG--TAGTTGGGCTCGGCAATGTG 7135 Query 145848 CAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCCATGTCTATCAT 145907 | ||| || || || |||||||||||| | ||||||||||| ||||| | || || Sbjct 7134 AATATTGAGCGACTGACTCTGATCAATGTACACGGCCCGGTCGGCCGCCATCTTAATGAT 7075 Query 145908 GCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGTGCTGGGGTATTTC 145967 | |||| | ||| ||||| | ||||| |||||||||||| | |||||| || || Sbjct 7074 GGTCTTTTGTGAAATCTCCCACACAGTTTTGTAGAGATCCTTGAGCTCCTGGGGAATCTC 7015 Query 145968 GTCAATGTTCTG 145979 ||| || ||||| Sbjct 7014 GTCGATTTTCTG 7003 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130 ||||||||||| || | || ||||| | | ||| | |||||| ||| | ||||||| Sbjct 6288 ACCTGAAACTCTCCAGACAGGACGCGACGCGTATAGATGTTGCTCGTGTATGGCTCGATT 6229 Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATG 146175 || |||||||| || || ||||||||||||| || || |||||| Sbjct 6228 GATTCGTTGTTGCCAAGAATCTGCGCCGTCGAGGCAGTGGGCATG 6184 >seq18922 Length=6667 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 47502 GAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 ||||| |||||||| || ||| | |||||||||||||||||||| || |||||||||||| Sbjct 4344 GAGAACCCATTCGACTTCATGGAAAACATTTCGCTCGAGGGCAAAACGAACTTTTTCGAG 4403 Query 47562 AAGCGCGTCGGCGAATA 47578 ||||| ||||||||||| Sbjct 4404 AAGCGTGTCGGCGAATA 4420 >seq166919 Length=61529 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||| || || ||| | | || || || || ||| || |||||||| || Sbjct 59145 GTGGATTCTTTCTGGATGTTGAAGTAGCTCAGGGTACGTCCATCTTCCAGCTGTTTGCCG 59086 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | ||||||||| || || |||||||| ||||| |||||| ||| Sbjct 59085 GCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCTCTGTCCTGGATTTTGGCTTTG 59026 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| ||||| | || | |||||||| || || || Sbjct 59025 ACGTTCTCGATCGTGTCACTTGGCTCAACTTCAAGAGTGATAGTTTTGCCAGTGAGGGTC 58966 Query 127097 TTTACAAAAATCTGCAT 127113 ||||| ||||||||||| Sbjct 58965 TTTACGAAAATCTGCAT 58949 >seq172076 Length=28491 Score = 89.7 bits (98), Expect = 5e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 47502 GAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 || || || ||||| || ||| | |||||||||||||||||||| || |||||||||||| Sbjct 1328 GAAAACCCCTTCGACTTCATGGAAAACATTTCGCTCGAGGGCAAAACGAACTTTTTCGAG 1269 Query 47562 AAGCGCGTCGGCGAATA 47578 ||||| || |||||||| Sbjct 1268 AAGCGTGTTGGCGAATA 1252 >seq179804 Length=4616 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 145852 TTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCCATGTCTATCATGCAC 145911 || || || ||||||||||||||| | ||||||||||| ||||| | || ||| | Sbjct 2786 TTAAGCGACTGGCTCTGATCAATGTACACGGCCCGGTCGGCCGCCATCTTAATGATGGTC 2845 Query 145912 TTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGTGCTGGGGTATTTCGTCA 145971 ||| | ||| ||||| | ||||| |||||||||||| | |||||| || ||||| Sbjct 2846 TTTTGTGAAATCTCCCACACAGTTTTGTAGAGATCCTTGAGCTCCTGGGGAATCTCGTCG 2905 Query 145972 ATGTTCTG 145979 || ||||| Sbjct 2906 ATTTTCTG 2913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474380954009680