Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq179804 86.0 8e-12 >seq179804 Length=4616 Score = 86.0 bits (94), Expect = 8e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961 |||||||||| ||||||||||||| | | || ||||| || | || || ||||| || Sbjct 3653 ATAGATGTTGCTCGTGTATGGCTCGATTGATTCGTTGTTGCCAAGAATCTGTGCTGTCGA 3712 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACC 116003 ||||||||||||||| || | || || |||||||| | ||| Sbjct 3713 GGCTGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGCACACC 3754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612062336862120