Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq113541 178 5e-39 seq158834 156 2e-32 seq35469 150 7e-31 seq174778 147 9e-30 seq159113 91.5 6e-13 >seq113541 Length=19162 Score = 178 bits (196), Expect = 5e-39 Identities = 413/610 (68%), Gaps = 22/610 (4%) Strand=Plus/Minus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||| | ||||| || |||||||| ||||| || || || |||||||||||| | || | Sbjct 9489 ATTCAGGAAATCGTCCTTGTAGGTGGTTCAACGCGGATCCCTAAAATTCAAAAACTGCTC 9430 Query 451952 TCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 || | || || ||| |||| ||| | || || || ||||||||||| Sbjct 9429 CAGGATTTCATGGGTGGCAAAGAACTCAATAAATCAATCAACCCGGACGAAGCTGTTGCT 9370 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TCAGATGATGAAAAATTAGGAGA 452070 || |||||||| ||||| |||||| |||| |||||| ||||| || || || ||| Sbjct 9369 TACGGTGCTGCTGTTCAGGCAGCTGTTCTGACAGGTGTCAGA-GACGATGCGGTAAAAGA 9311 Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130 | || | || || || || ||||| || ||||| ||||||||| |||||| |||| Sbjct 9310 CGTCTTGCTCGTTGACGTTACTCCTCTTTCCCTTGGCATTGAAACAGTTGGTGGTGTGAT 9251 Query 452131 GACTAATTTAATTAAACGAG-GAACTTC---TATTCCTTGTAAAAAGA-GTCAAA--CAT 452183 |||||| | | |||| ||| ||| ||| || | ||||| |||||| ||| Sbjct 9250 GACTAAACTCGT----CGAGCGAAATTCGCATATCCCA---ACAAAGATGTCAAAGACAT 9198 Query 452184 TTAGTACAGCAAG-TGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGT 452242 | | || | | | ||||||||||||||||||||| |||||||| || || || ||||| Sbjct 9197 TCACAAC-GTATGCTGATAACCAACCAGGTGTAACCATTCAAGTCTTCGAGGGTGAACGG 9139 Query 452243 GCAATGACACGAGATAATAATAAACTAGGAGAATT--TACTCTTTCAAACATTCCTCCTA 452300 || ||||| || || |||| ||||| |||| |||| | || || ||| Sbjct 9138 GCTATGACTAAGGACAACAATATTCTAGGCAAATTCGAACTCAAT--GGTATACCGCCTG 9081 Query 452301 TGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTA 452360 ||| | || ||| || || || | | | ||| ||||||| || || || |||| Sbjct 9080 CACCACGTGGCGTTCCCCAGATAGAGGTATCTTTTGACATTGATGCGAACGGAATCCTTA 9021 Query 452361 ATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATA 452420 |||| || || || || ||| | | ||| | ||||| ||| | || || Sbjct 9020 ATGTCAGCGCCGTAGATAAAGGTACGAATATATCGAACAAAATCCAAATCAACAACGACC 8961 Query 452421 AAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGG 452480 ||| || || ||||||||||| || ||||| ||||||||||||||| || | Sbjct 8960 GTGGCCGATTGTCGAAAGAAGATATCGATCGCATGGTGAATGAAGCAGAAAAATATAAAG 8901 Query 452481 ATGATGATGA 452490 ||| ||||| Sbjct 8900 CTGAAGATGA 8891 Score = 154 bits (170), Expect = 6e-32 Identities = 265/378 (70%), Gaps = 9/378 (2%) Strand=Plus/Minus Query 451233 AAACT-TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||||| ||||| || |||||| | || |||||||| || |||||||| |||| || Sbjct 10149 AAACTGTTTGCCCCCGAAGAAGTAAGCTCAATGGTTCTCACAAAAATGAAGCAAACGGCT 10090 Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351 || ||||| | || || | ||||| || || || ||||| || |||||||| Sbjct 10089 GAGGAATATCTGGGACAGAGTGTGAAAGATGCGGTTATAACAGTTCCAGCGTATTTCAAC 10030 Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411 ||||| || | | || || || ||||||||||||||||| || | |||||| | | Sbjct 10029 GATGCCCAGAGACTTGCCACGAAGGATGCAGGACATATTGCCGGACTGAATGTTTTAAGG 9970 Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA 451471 || | ||||| || || ||||| ||| | ||||||||||| ||| || ||| | | Sbjct 9969 ATAGTGAATGAGCCAACTGCAGCGGCTTTGGCATATGGACT-GGATAA--AAATATCAAA 9913 Query 451472 GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTT 451531 | || || ||| | || | || ||| ||||||| || || ||| ||| |||| Sbjct 9912 GGTGAGAAGAATGTGTTGATTTTCGATCTTGGTGGGGGCACATTTGACGTGTCTATACTG 9853 Query 451532 TCAATTGAAGATGG---GGTATTTGAAGT-AAAGGCAACCAATGGTGATACTCATCTAGG 451587 | || || ||||| |||||||||| ||| || || |||||||| ||| |||| Sbjct 9852 ACCATAGATGATGGATCCCTATTTGAAGTCAAAAGC-ACTGCGGGTGATACACATTTAGG 9794 Query 451588 AGGTGAAGATATTGATAA 451605 ||||||||| ||||||| Sbjct 9793 TGGTGAAGATTTTGATAA 9776 >seq158834 Length=15858 Score = 156 bits (172), Expect = 2e-32 Identities = 408/610 (67%), Gaps = 22/610 (4%) Strand=Plus/Plus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||| | ||||| || |||||||| ||||| || || || |||||||||||| | || | Sbjct 7648 ATTCAGGAAATCGTCCTTGTAGGTGGTTCAACGCGGATCCCTAAAATTCAAAAACTGCTC 7707 Query 451952 TCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 || | || || ||| |||| ||| | || || || ||||||||||| Sbjct 7708 CAGGATTTCATGGGTGGCAAAGAACTCAATAAATCAATTAACCCGGACGAAGCTGTTGCT 7767 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TCAGATGATGAAAAATTAGGAGA 452070 || |||||||| || || ||||| |||| |||||| || | || || || ||| Sbjct 7768 TACGGTGCTGCTGTACAGGCAGCGGTTCTGACAGGTGTCCGG-GACGATGCGGTAAAAGA 7826 Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130 | || | || || || || ||||| || ||||| | |||||||||||||| |||| Sbjct 7827 CGTCTTGCTCGTTGACGTTACTCCTCTGTCACTTGGCATCGAAACAGCTGGTGGTGTGAT 7886 Query 452131 GACTAATTTAATTAAACGAG-GAACTTC---TATTCCTTGTAAAAAGA-GTCAAA--CAT 452183 |||||| | | |||| | | ||| |||||| | ||||| |||||| ||| Sbjct 7887 GACTAAACTCGT----CGAGCGCAATTCGCATATTCCC---ACAAAGATGTCAAAGACAT 7939 Query 452184 TTAGTACAGCAAG-TGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGT 452242 | | || | | | ||||| |||||||||||||||||||||||| || || || || || Sbjct 7940 TCACAAC-GTATGCTGATAGCCAACCAGGTGTAACTATTCAAGTCTTCGAGGGTGAGCGG 7998 Query 452243 GCAATGACACGAGATAATAATAAACTAGGAGAATT--TACTCTTTCAAACATTCCTCCTA 452300 || ||||| || || |||| ||||| |||| |||| | || | ||| Sbjct 7999 GCCATGACCAAGGACAACAATATTCTAGGCAAATTCGAACTCAAT--GGTATACAACCTG 8056 Query 452301 TGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTA 452360 ||| | || ||| || || || | | | ||| |||||| || || || |||| Sbjct 8057 CACCACGTGGCGTTCCCCAGATAGAGGTATCTTTTGACATTGATGAGAACGGAATCCTTA 8116 Query 452361 ATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATA 452420 |||| || || || || ||| | | ||| | ||||| ||| | || ||| Sbjct 8117 ATGTCAGCGCCGTAGATAAAGGTACGAATATATCGAACAAAATCCAAATCAACAACGATC 8176 Query 452421 AAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGG 452480 ||| ||||| |||||||| || || ||||| ||||||||||||||| ||| | Sbjct 8177 GTGGCCGATTATCAAAAGAAGACATAGATCGCATGGTGAATGAAGCAGAAAAATACAAAG 8236 Query 452481 ATGATGATGA 452490 ||| ||||| Sbjct 8237 CTGAAGATGA 8246 Score = 149 bits (164), Expect = 2e-30 Identities = 272/393 (69%), Gaps = 8/393 (2%) Strand=Plus/Plus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 |||||||| |||| ||| ||||| || |||||| | || |||||||| || || Sbjct 6973 TATAAAGGCGAAAGGAAACAGTTTGCCCCCGAAGAAGTAGGCTCAATGGTTCTCACAAAG 7032 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||||| |||| || || ||||| | || || | || || || || || ||| Sbjct 7033 ATGAAGCAAACGGCTGAGGAATATCTAGGACAGAGTGTGAAAGACGCGGTTATAACAGTT 7092 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || || |||||||| ||||| || | | || || || |||||||| |||||||| || Sbjct 7093 CCAGCGTATTTCAACGATGCCCAGAGACTTGCCACGAAGGATGCAGGGCATATTGCCGGA 7152 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGA 451456 |||||||| | | || | || || || || ||||| ||| | ||||||||||| | Sbjct 7153 CTAAATGTTTTAAGGATAGTGAACGAGCCAACTGCAGCGGCTTTGGCATATGGACTTGAT 7212 Query 451457 AAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCAT 451516 ||| || | ||| || || || ||| | || | || ||| ||||||| || || | Sbjct 7213 AAA--AATATAAA-AGGTGAGAAGAATGTGTTGATTTTCGATCTTGGTGGGGGCACATTT 7269 Query 451517 GATACTTCTGTACTTTCAATTGAAGATGGG---GTATTTGAAGT-AAAGGCAACCAATGG 451572 || ||| |||| | || || |||||| |||||||||| ||| || || || Sbjct 7270 GACGTGTCTATACTGACCATAGATGATGGGTCCCTATTTGAAGTCAAAAGC-ACTGCGGG 7328 Query 451573 TGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 |||||| ||| | || ||||||||| | ||||| Sbjct 7329 TGATACACATTTGGGTGGTGAAGATTTCGATAA 7361 >seq35469 Length=31111 Score = 150 bits (166), Expect = 7e-31 Identities = 468/718 (65%), Gaps = 16/718 (2%) Strand=Plus/Plus Query 450905 aaaaaaGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAA 450964 |||| | ||| || ||||| ||||| || ||||| | || ||||| || || | |||| Sbjct 21363 AAAACACCAGCTATCGGAATAGATCTCGGCACCACTTACTCTTGTGTTGGGGTATTCCAA 21422 Query 450965 AATGGAAATGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGT 451023 | ||||| || |||||||| |||||||| || || | || || | || || | || Sbjct 21423 CACGGAAAAGTGGAAATTATTGCAAATGATCAGGGCAACAGGA-CAACACCAAGCTATGT 21481 Query 451024 AAGTTTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAAT--GGTAAATTCA 451081 |||| || || ||| ||||| | || | | || ||| ||| || Sbjct 21482 CGCATTTAGTGACTCGGAACGACTTATTGGTGATGGCGCCAAA--AATCAGGCCGCGATG 21539 Query 451082 AATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGAT 451141 ||| | || ||||| |||| ||| || || | | ||||| || | | | || ||| Sbjct 21540 AATCCAAAGAACACCGTATTTGACGCGAAGAGACTTATTGGACGCAAATTCAACGACGAT 21599 Query 451142 ACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCC 451201 | ||||||| || | ||| || || | |||| || || | |||| || Sbjct 21600 AGCGTACAAAGTGACATGAAACACTGGTCGTTCAATGTCGTCAACGTCGATGGAAGTCCG 21659 Query 451202 TATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCT 451261 | ||| ||| | |||||||| ||||| ||| ||||| || || ||||| || Sbjct 21660 AAGATTGAAGCGGAATATAAAGGCGAAACCAAACGCTTTGCGCCGGAGGAAATCAGCTCA 21719 Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 ||||| || || |||||||| ||||||| || ||| | || ||| | | ||| Sbjct 21720 ATGGTGCTGACAAAAATGAAGCAAACAGCGGAGGCCTATCTGGGACAACCATTGAAGGAT 21779 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| || || || || || |||||||| || | || | | ||| || |||||||| Sbjct 21780 GCAGTTATCACCGTGCCTGCATATTTCAACGACTCGCAGAGACTAGCTACGAAAGATGCG 21839 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||||||||||| ||| | ||||| ||| | || || || ||||| || || || || ||| Sbjct 21840 GGACATATTGCCGGTCTCAATGTGCTTAGGATAATAAACGAACCAACTGCCGCCGCGCTA 21899 Query 451442 GCATATGGACT--AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 || || || || | |||||| || || || |||||| | || | || ||| Sbjct 21900 GCTTACGGGCTTGACAAAAATCTGAA-----AGGCGAGAAAAATGTGTTGATCTTCGATC 21954 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAG 451556 | || || || || |||| || | || | || || || || | || || | Sbjct 21955 TCGGAGGTGGTACCTTTGATGTATCGATTCTGACCATCGATGAAGGCTCATTGTTCGAGG 22014 Query 451557 TAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 | || || ||||||||||||||| || || || ||| | |||||| ||| || Sbjct 22015 TCAAAAGTACTGCTGGTGATACTCATCTCGGTGGCGAGGATTTCGATAATAGAATGGT 22072 >seq174778 Length=22833 Score = 147 bits (162), Expect = 9e-30 Identities = 366/551 (66%), Gaps = 6/551 (1%) Strand=Plus/Minus Query 450905 aaaaaaGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAA 450964 |||| | ||| || ||||| ||||| || ||||| | || ||||| || || | |||| Sbjct 3547 AAAACACCAGCTATCGGAATAGATCTCGGCACCACTTACTCTTGTGTTGGGGTATTCCAA 3488 Query 450965 AATGGAAATGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGT 451023 | ||||| || |||||||| |||||||| || || | || || | || || | || Sbjct 3487 CACGGAAAAGTGGAAATTATTGCAAATGATCAGGGCAACAGGA-CAACACCAAGTTATGT 3429 Query 451024 AAGTTTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAA--TCAATGGTAAATTCA 451081 |||| || || ||| ||||| | || | | || ||| ||| ||| Sbjct 3428 CGCATTTAGTGACTCGGAACGACTTATTGGTGATGGCGCAAAAAATCAGGCTGCAATG-- 3371 Query 451082 AATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGAT 451141 ||| | || ||||| |||| ||||| || | | ||||| || | | | || ||| Sbjct 3370 AATCCGAAGAACACCGTATTCGATGCGAAGAGACTTATTGGACGCAAATTCAACGACGAT 3311 Query 451142 ACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCC 451201 | ||||||| || | ||| || || | |||| || || | |||| || Sbjct 3310 AGCGTACAAAGTGACATGAAACACTGGTCGTTCAATGTCGTCAACGTCGATGGAAGTCCG 3251 Query 451202 TATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCT 451261 | ||| ||| | || ||||| ||||| ||| ||||| || || ||||| || Sbjct 3250 AAGATTGAAGCGGAATACAAAGGAGAAACCAAACGCTTTGCGCCGGAGGAAATCAGCTCA 3191 Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 ||||| | || |||||||| ||||||| || ||| | || ||| | | ||| Sbjct 3190 ATGGTATTGACAAAAATGAAGCAAACAGCGGAGGCTTATCTGGGACAACCATTGAAGGAT 3131 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| || || || || || |||||||| || | || | | ||| || |||||||| Sbjct 3130 GCAGTTATCACCGTGCCAGCATATTTCAACGACTCGCAGAGACTAGCTACGAAAGATGCG 3071 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||||||||||| ||| | ||||| ||| | || || || ||||| || || || || ||| Sbjct 3070 GGACATATTGCCGGTATCAATGTGCTTAGGATAATAAACGAACCAACTGCCGCCGCGCTA 3011 Query 451442 GCATATGGACT 451452 || || ||||| Sbjct 3010 GCTTACGGACT 3000 >seq159113 Length=23055 Score = 91.5 bits (100), Expect = 6e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || ||||| || || || |||||||| || || || || Sbjct 22083 AATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACTCTCGAGGTGGAGCCAAG 22142 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | || ||| ||||| || || || || ||||| ||||| || Sbjct 22143 TGACACAATCGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCCCCTGACCA 22202 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT-TTGGCGGATTATA 391227 || | |||| ||| | || ||||||||||||||||| | ||| || || || || | Sbjct 22203 GCAGAGGCTAATCTTCGCTGGAAAACAACTTGAAGATGGTCGCACTCTTAGC-GACTACA 22261 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGTATT 391261 |||| | ||||| | || ||||| || || || Sbjct 22262 ATATCCAAAAGGAATCTACTCTTCATTTGGTGTT 22295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1970949085549956