Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq44860 98.7 1e-15 >seq44860 Length=53707 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | ||| || || ||||||||| | ||| || || ||||| |||| |||||| Sbjct 4471 TACTCCACAATCTCCGTGCACAAGTTGCTGCACTTGATGGTGCCCAAGTTCTGTTGGTTG 4412 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627 ||||| |||||| || |||||||||||||||||||| || || ||||| || | | Sbjct 4411 CTCTTCCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGAGTTCCGGTCTCGACTTGCGCC 4352 Query 106628 TTGAGAATTGCCTTCCACA 106646 | || ||| || | ||||| Sbjct 4351 TCGATAATGGCATACCACA 4333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588591343592680