Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq176294 131 4e-25 seq159113 131 4e-25 seq166919 122 2e-22 seq177713 107 4e-18 seq94379 107 4e-18 seq50026 107 4e-18 seq14326 102 2e-16 >seq176294 Length=1487 Score = 131 bits (144), Expect = 4e-25 Identities = 142/187 (76%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| ||||| ||||| || || ||||| ||| || || | ||||| || Sbjct 1446 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGTCCATCCTCA 1387 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| | || |||||||| |||||||| |||||||| || Sbjct 1386 AGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGG 1327 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 ||||| |||||||| || || ||||| |||| || ||||| ||||| | ||| Sbjct 1326 ATTTTGGCTTTGACGTTTTCGATCGTGTC---ACTTGGCTCGACTTCGAGGGTGATCGTT 1270 Query 195109 TTTCCTG 195115 ||||||| Sbjct 1269 TTTCCTG 1263 >seq159113 Length=23055 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||||| ||||| || || ||||| ||| || || | ||||| || Sbjct 22995 ACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGTCCATCCTCC 22936 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || ||||||||||| | || |||||||| |||||||| |||||||| || Sbjct 22935 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGG 22876 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 ||||| |||||||| || || ||||| |||| || ||||| ||||| | || Sbjct 22875 ATTTTGGCTTTGACGTTTTCGATCGTGTC---ACTTGGCTCAACTTCGAGGGTGATAGTT 22819 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 22818 TTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 Score = 127 bits (140), Expect = 5e-24 Identities = 141/187 (75%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||||||||| ||||| || || ||||| || || || | ||||| || Sbjct 22767 ACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCACTCAGGGTACGTCCATCCTCC 22708 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || ||||||||||| | || |||||||| |||||||| |||||||| || Sbjct 22707 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGG 22648 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 ||||| |||||||| || || ||||| |||| || ||||| ||||| | ||| Sbjct 22647 ATTTTGGCTTTGACGTTTTCGATCGTGTC---ACTTGGCTCAACTTCGAGGGTGATCGTT 22591 Query 195109 TTTCCTG 195115 ||||||| Sbjct 22590 TTTCCTG 22584 >seq166919 Length=61529 Score = 122 bits (134), Expect = 2e-22 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| ||||| ||||| || || ||| | | | || || | |||||||| Sbjct 59157 ACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGAAGTAGCTCAGGGTACGTCCATCTTCC 59098 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || ||||||||||| | || || ||||| |||||||| ||| |||| || Sbjct 59097 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCTCTGTCCTGG 59038 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 ||||| ||||||||||| || ||||| |||| || |||||||| || | || Sbjct 59037 ATTTTGGCTTTGACGTTCTCGATCGTGTC---ACTTGGCTCAACTTCAAGAGTGATAGTT 58981 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || |||||||| | ||||| Sbjct 58980 TTGCCAGTGAGGGTCTTTACGAAAATCTGCAT 58949 Score = 102 bits (112), Expect = 2e-16 Identities = 120/161 (75%), Gaps = 6/161 (4%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || ||||||||||| | || || ||||| |||||||| ||| Sbjct 59334 CCATCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCT 59275 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGG 195099 ||||| || ||||| ||||||||||| || ||||| |||| || |||||||| Sbjct 59274 TTGTCCTGGATTTTGGCTTTGACGTTCTCGATCGTGTC---ACTTGGCTCAACTTCAAGA 59218 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | || || ||||| | ||||| Sbjct 59217 GTGATAGTTTTGCCAGTGACGGTCTTCACGAAAATCTGCAT 59177 >seq177713 Length=14691 Score = 107 bits (118), Expect = 4e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || || || || || || ||||| ||| ||||| | ||||| || Sbjct 1309 ACAAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCC 1250 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| || | || ||||| ||||| |||||||| || || || Sbjct 1249 AGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGG 1190 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| || ||||| || ||||| ||||| | ||||| Sbjct 1189 ATCTTGGCCTTCACGTTCTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTG 1130 Query 195112 CCTG 195115 |||| Sbjct 1129 CCTG 1126 >seq94379 Length=7077 Score = 107 bits (118), Expect = 4e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || || || ||||| ||| ||||| | ||||| || Sbjct 6927 ACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCC 6986 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| || | || ||||| |||||||||||||| ||||| || Sbjct 6987 AGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGG 7046 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || || |||||||| || ||||| Sbjct 7047 ATCTTGGCTTTCACGTTCTCGATCGTGTC 7075 >seq50026 Length=5431 Score = 107 bits (118), Expect = 4e-18 Identities = 121/161 (75%), Gaps = 6/161 (4%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || ||||||||||| | || |||||||| |||||||| ||| Sbjct 834 CCATCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCT 775 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGG 195099 ||||| || ||||| ||||||||||| || ||||| |||| || |||||||| Sbjct 774 TTGTCCTGGATTTTGGCTTTGACGTTCTCGATCGTGTC---ACTTGGCTCAACTTCAAGA 718 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | || || ||||| | ||||| Sbjct 717 GTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 677 >seq14326 Length=16399 Score = 102 bits (112), Expect = 2e-16 Identities = 120/161 (75%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || ||||||||||| | || ||| |||| |||||||| ||| Sbjct 10365 CCATCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGCCTGGGGGAATGCCCTCT 10424 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGG 195099 ||||| || ||||| ||||||||||| || ||||| |||| || |||||||| Sbjct 10425 TTGTCCTGGATTTTGGCTTTGACGTTCTCGATCGTGTC---ACTTGGCTCAACTTCAAGA 10481 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | || || ||||| | ||||| Sbjct 10482 GTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 10522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106803350596169