Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11]
188,407 sequences; 1,026,046,400 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq159113 136 3e-27
seq177713 109 4e-19
seq166919 100 2e-16
seq176294 87.8 1e-12
seq44755 84.2 1e-11
>seq159113
Length=23055
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| ||| ||||||||| ||||| ||||| ||| | ||| |||| |||
Sbjct 22995 ACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGGGTACGTCCATCCTCC 22936
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| ||||| || || || | ||||||||| | || | ||||| |||||
Sbjct 22935 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGG 22876
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || ||||||| | | |||| |||| | |||||| |||| ||| || |||||
Sbjct 22875 ATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACTTCGAGGGTGATAGTTTTG 22816
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| |||||||| || |||||||||
Sbjct 22815 CCAGTGAGGGTCTTCACGAAAATCTGCATA 22786
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| |||| ||| ||||||||| ||||| ||||| ||| | ||| |||| |||
Sbjct 22767 ACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCACTCAGGGTACGTCCATCCTCC 22708
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| ||||| || || || | ||||||||| | || | ||||| |||||
Sbjct 22707 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGG 22648
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || ||||||| | | |||| |||| | |||||| |||| ||| || ||||||
Sbjct 22647 ATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACTTCGAGGGTGATCGTTTTT 22588
Query 34953 CC 34954
||
Sbjct 22587 CC 22586
Score = 84.2 bits (92), Expect = 1e-11
Identities = 151/219 (69%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| ||||| |||| || ||| || || || || ||||| ||| | || ||||
Sbjct 22296 CAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTAAGAGTGCGACCATC 22237
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| || |||||||| || || ||||| | |||||||| | || | ||||| |||||
Sbjct 22236 TTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGGGGAATACCCTCTTTGTC 22177
Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946
|||||| || || || || || | |||| | ||| || |||| || |||
Sbjct 22176 CTGAATCTTTGCCTTTAC--ATTCTCGATTGTGTCACTTGGCTCCACCTCGAGAGTAATG 22119
Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985
|| || || || || ||||| || ||||||||||| |||
Sbjct 22118 GTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATTTTC 22080
>seq177713
Length=14691
Score = 109 bits (120), Expect = 4e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || | || |||| ||||||||||| ||||| ||
Sbjct 281 TTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAA 222
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | |||||||| | || | || |||||||| ||||| ||| |||
Sbjct 221 GATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTT 162
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | |||| || | || |||||| || | ||| ||||| || || || || ||||||||
Sbjct 161 TTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 102
Query 34970 AAAGATCTGCATA 34982
|||||||||||||
Sbjct 101 AAAGATCTGCATA 89
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || | || |||| ||||||||||| ||||| ||
Sbjct 1520 TTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCGGCGAA 1461
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | |||||||| | || | || |||||||| ||||| || |||
Sbjct 1460 GATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 1401
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | | |||||| || | ||| ||||| || || || || ||||||||
Sbjct 1400 CTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1341
Query 34970 AAAGATCTGCATA 34982
||||||||||||
Sbjct 1340 GAAGATCTGCATA 1328
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||| ||||| ||||| || | || |||| ||||||||||| || || ||
Sbjct 1748 TTCTTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCGAA 1689
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | |||||||| | || | || |||||||| ||||| || |||
Sbjct 1688 GATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 1629
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | | |||||| || | ||| ||||| || || || || ||||||||
Sbjct 1628 CTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1569
Query 34970 AAAGATCTGCATA 34982
||||||||||||
Sbjct 1568 GAAGATCTGCATA 1556
>seq166919
Length=61529
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| ||| ||||||||| ||||| ||| ||| | ||| |||| |||
Sbjct 59157 ACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGAAGTAGCTCAGGGTACGTCCATCTTCC 59098
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| ||||| || || || | ||||| ||| | || | ||||| ||||
Sbjct 59097 AGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCTCTGTCCTGG 59038
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || ||||||| | |||| |||| | |||||| || | || || |||||
Sbjct 59037 ATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAACTTCAAGAGTGATAGTTTTG 58978
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| ||||| || || |||||||||
Sbjct 58977 CCAGTGAGGGTCTTTACGAAAATCTGCATA 58948
>seq176294
Length=1487
Score = 87.8 bits (96), Expect = 1e-12
Identities = 152/219 (69%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| ||||| |||| || ||| || || ||||| ||||| ||| | || ||||
Sbjct 1012 CAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTAAGAGTGCGACCATC 953
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| || |||||||| || || || |||| |||||||| | || | ||||| |||||
Sbjct 952 TTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGGGGAATACCCTCTTTGTC 893
Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946
|||||| || || || || || | |||| | ||| || |||| || |||
Sbjct 892 CTGAATCTTTGCCTTTAC--ATTCTCGATGGTGTCACTTGGCTCCACCTCGAGAGTAATG 835
Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985
|| || || || || ||||| || ||||||||||| |||
Sbjct 834 GTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATTTTC 796
>seq44755
Length=507
Score = 84.2 bits (92), Expect = 1e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||| | ||| | ||| ||| ||||| ||||| ||||| || | || |||| ||
Sbjct 215 AACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTC 274
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| || ||||| || || || | |||||||| | || | || ||||||||
Sbjct 275 CAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTG 334
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| || ||| | || | || | || |||||| || | ||| ||||| ||
Sbjct 335 GATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTT 394
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || || ||||| ||||||||||||
Sbjct 395 GCCAGTCAGGGTTTTCACGAAGATCTGCATA 425
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || | || |||| ||||||||||| || || ||
Sbjct 5 TTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCGAA 64
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | |||||||| | || | || ||||| || ||||| || |||
Sbjct 65 GATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 124
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | | |||||| || | ||| ||||| || || || || ||||||||
Sbjct 125 CTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 184
Query 34970 AAAGATCTGCATA 34982
||||||||||||
Sbjct 185 GAAGATCTGCATA 197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323888172979896
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