Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq166919 91.5 1e-13 >seq166919 Length=61529 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| |||||||| || || ||| | | | | || | |||| |||| || Sbjct 59151 TGAAGGGTGGATTCTTTCTGGATGTTGAAGTAGCTCAGGGTACGTCCATCTTCCAGCTGT 59092 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | | ||| ||||| || |||||||| ||| | || || ||||| Sbjct 59091 TTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCTCTGTCCTGGATTTTG 59032 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || | || | |||||| | || ||||||||||||| |||||||| || Sbjct 59031 GCTTTGACGTTCTCGATCGTGTCACTTGGCTCAACTTCAAGAGTGATAGTTTTGCCAGTG 58972 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || ||||| || |||||||| Sbjct 58971 AGGGTCTTTACGAAAATCTGCAT 58949 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| |||| ||||| || || || || | | ||| ||||| || |||||||| |||| Sbjct 59333 CATCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCTT 59274 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 | || || ||||| ||| || | || | |||||| | || ||||||||||||| Sbjct 59273 TGTCCTGGATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAACTTCAAGAGTGA 59214 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| || | || || || || |||||||| Sbjct 59213 TAGTTTTGCCAGTGACGGTCTTCACGAAAATCTGCAT 59177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395368461451299