Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq176294 82.4 6e-11 >seq176294 Length=1487 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || || || || || |||| || || |||||||| ||| ||| || Sbjct 797 AAAATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACTCTCGAGGTGGAGCCA 856 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || | | || | ||| ||| || ||||||||||| | ||| || Sbjct 857 AGTGACACCATCGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCCCCTGAC 916 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || |||||||| ||||| || || |||||| | |||||| | ||| | ||| || Sbjct 917 CAGCAGAGACTGATCTTCGCTGGAAAACAACTTGAAGATGGTCGCACTCTTAGCGACTAC 976 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||||| ||||| ||||||||||| || |||| || Sbjct 977 AACATCCAAAAGGAATCTACTCTTCATTTGGTGTT 1011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424427981111253