Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11]
188,407 sequences; 1,026,046,400 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq120978 104 2e-17
seq22085 98.7 8e-16
>seq120978
Length=37574
Score = 104 bits (114), Expect = 2e-17
Identities = 118/158 (75%), Gaps = 3/158 (2%)
Strand=Plus/Minus
Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380
||||| || ||||| || || | |||| ||| ||||| | ||| || ||||| |||||
Sbjct 31964 GTCTCTGGATTGTCGCAGGCCTGGCACAGCACGAACTTCCTGATAAAGCCATCGAGCAGA 31905
Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440
||||| | ||| | | ||| || ||||| |||||| | || ||||| |||| ||
Sbjct 31904 TCCTGCAGCTTGCCCGCGTCATGACTTCCGTTCACGATGTAGCGCTCGTTCTTGT---CG 31848
Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT 34478
| |||| ||| |||||||||||||| || ||||||||
Sbjct 31847 AACTGCACTTGGGCGCCCAGCTCGCAGCCAAAGTACTT 31810
>seq22085
Length=21336
Score = 98.7 bits (108), Expect = 8e-16
Identities = 117/158 (74%), Gaps = 3/158 (2%)
Strand=Plus/Plus
Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380
|| || || || || || || | |||| ||| ||||| | ||||| ||||| |||||
Sbjct 5409 GTTTCGGGATTATCGCAGGCCTGGCACAGCACGAACTTCCTAATGAAGCCATCGAGCAGA 5468
Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440
||||| | ||| ||| ||| || ||||| |||||| | || ||||| |||| ||
Sbjct 5469 TCCTGCAGCTTGCCGGCGTCATGACTTCCGTTCACGATGTAGCGCTCGTTCTTGT---CG 5525
Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT 34478
| |||| ||| |||||||||||||| || ||||||||
Sbjct 5526 AACTGCACTTGGGCGCCCAGCTCGCAGCCAAAGTACTT 5563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 411893628860651
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |