Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq159113 156 8e-33 seq176294 147 4e-30 seq88483 136 8e-27 seq177713 134 3e-26 seq26467 132 9e-26 seq44755 120 6e-22 seq166919 114 3e-20 seq37094 89.7 1e-12 seq118296 86.0 1e-11 >seq159113 Length=23055 Score = 156 bits (172), Expect = 8e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| || || || ||||||||||| || || ||||| || || ||| | | ||| Sbjct 22298 CGCAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTAAGAGTGCGACCA 22239 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| |||||||||||||| |||||||| || || || || || || || || || || Sbjct 22238 TCTTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGGGGAATACCCTCTTTG 22179 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || ||||||||||| |||||||| || || || ||| | || || || || | ||| || Sbjct 22178 TCCTGAATCTTTGCCTTTACATTCTCGATTGTGTCACTTGGCTCCACCTCGAGAGTAATG 22119 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| |||| ||||| || || ||||||||| Sbjct 22118 GTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 22083 Score = 120 bits (132), Expect = 6e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| || | ||| ||||| ||||||||||| || || || || Sbjct 23015 TACCACCACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGC 22956 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || ||||| || || ||||| || || || || ||||| | Sbjct 22955 TCAGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGG 22896 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || || || || || ||||| || ||||| ||||| ||| | || || | Sbjct 22895 GAATGCCCTCTTTGTCCTGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAA 22836 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || || ||||| || | ||||| || || |||||||| Sbjct 22835 CTTCGAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| || | || ||||| ||||||||||| || || || ||| Sbjct 22787 TACCACCACGCAGACGCAGGACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCAC 22728 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || ||||| || || ||||| || || || || ||||| | Sbjct 22727 TCAGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGG 22668 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || || || || || ||||| || ||||| ||||| ||| | || || | Sbjct 22667 GAATGCCCTCTTTGTCCTGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAA 22608 Query 82762 CTTCCAAAGTTATCGTCTTGCCTG 82785 |||| | || ||||| || |||| Sbjct 22607 CTTCGAGGGTGATCGTTTTTCCTG 22584 >seq176294 Length=1487 Score = 147 bits (162), Expect = 4e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| || || || ||||||||||| || || || || || || ||| | | ||| Sbjct 1014 CGCAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTAAGAGTGCGACCA 955 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| |||||||||||||| ||||| ||||| || || || || || || || || || Sbjct 954 TCTTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGGGGAATACCCTCTTTG 895 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || ||||||||||| |||||||| || || || ||| | || || || || | ||| || Sbjct 894 TCCTGAATCTTTGCCTTTACATTCTCGATGGTGTCACTTGGCTCCACCTCGAGAGTAATG 835 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || | ||||| || || ||||||||| Sbjct 834 GTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATT 799 Score = 93.3 bits (102), Expect = 8e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| || | || || || ||||||||||| || || || || Sbjct 1466 TACCACCACGCAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGC 1407 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || || || ||||| || || || || ||||| | Sbjct 1406 TCAGGGTACGTCCATCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGG 1347 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || || || || || ||||| || ||||| ||||| ||| | || || | Sbjct 1346 GAATGCCCTCTTTGTCCTGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCGA 1287 Query 82762 CTTCCAAAGTTATCGTCTTGCCTG 82785 |||| | || ||||| || |||| Sbjct 1286 CTTCGAGGGTGATCGTTTTTCCTG 1263 >seq88483 Length=20907 Score = 136 bits (150), Expect = 8e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || || ||||||||||| || ||||| || || || || Sbjct 419 TACCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 478 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||| || || || ||||| || || ||||| || || || || || |||| Sbjct 479 TCAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAG 538 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || || ||||| || || |||||||| || |||||| | ||||| | Sbjct 539 GGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGA 598 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 | || | || || ||||| || || | || || ||||| |||||||| ||| Sbjct 599 CCTCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCATGATT 651 >seq177713 Length=14691 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| || || || | ||| || || ||||||||||| || || || || Sbjct 1785 TACCACCGCGCAAGCGAAGCACAAGGTGGAGCGTGGATTCTTTCTGGATGTTGTAGTCGC 1726 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || || || || ||||| ||||| ||||| || || || || || |||| Sbjct 1725 TCAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAG 1666 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || || ||||| || || || || || ||||| || | || || | Sbjct 1665 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAA 1606 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || |||||||| |||| ||||| || || |||||||| Sbjct 1605 CTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1557 Score = 116 bits (128), Expect = 7e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| || || || ||||| || || ||||| || || || || || ||||| Sbjct 484 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 425 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| || ||||| ||||| || || || ||||| || | || || ||| Sbjct 424 ATGCCTTCCTTATCCTGGATCTTGGCTTTCACGTTCTCGATCGTGTCGCTTGGCTCAACT 365 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| |||| ||||| || || |||||||| Sbjct 364 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 318 Score = 116 bits (128), Expect = 7e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| || || || | ||| || || ||||| ||||| || || || || Sbjct 1329 TACCACCGCGCAAGCGAAGCACAAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGC 1270 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||| || || || ||||| || || ||||| || || || || || |||| Sbjct 1269 TCAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAG 1210 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| || || || || || ||||| || | || || | Sbjct 1209 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTGGGCTCAA 1150 Query 82762 CTTCCAAAGTTATCGTCTTGCCTG 82785 |||||| || || |||||||||| Sbjct 1149 CTTCCAGGGTGATGGTCTTGCCTG 1126 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | ||| || || || | ||| || || ||||| ||||| || || || || Sbjct 2117 CCACCACGCAAGCGAAGCACAAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTC 2058 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| || || || ||||| || || ||||| || || || || || ||||| Sbjct 2057 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 1998 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| || ||||| || || || || || ||||| || | || || ||| Sbjct 1997 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAACT 1938 Query 82764 TC 82765 || Sbjct 1937 TC 1936 >seq26467 Length=1226 Score = 132 bits (146), Expect = 9e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || || ||||||||||| || ||||| || || || || Sbjct 812 TACCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 753 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | |||||| || || ||||| || || || || || || || || || |||| Sbjct 752 TCAGAGTACGACCGTCCTCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAG 693 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| || || ||||| || || ||||| || || |||||| | ||||| | Sbjct 692 GGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGA 633 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 | || | || || ||||| || || | || || ||||| |||||||| ||| Sbjct 632 CCTCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCATGATT 580 >seq44755 Length=507 Score = 120 bits (132), Expect = 6e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 82617 GATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCA 82676 ||||| ||||| || || || || ||| | | || || || || ||||| ||||| Sbjct 3 GATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCG 62 Query 82677 AAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACA 82736 ||||| || || || || || ||||| || ||||||||||| || ||||| || || || Sbjct 63 AAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACG 122 Query 82737 TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTT 82796 || || ||||| || | || || ||||||| || || |||||||| |||| ||||| Sbjct 123 TTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 182 Query 82797 ACAAATATCTGCAT 82810 || || |||||||| Sbjct 183 ACGAAGATCTGCAT 196 >seq166919 Length=61529 Score = 114 bits (126), Expect = 3e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | ||| || || ||||||||||| || || || || Sbjct 59177 TACCACCACGCAGACGAAGGACCAGGTGAAGGGTGGATTCTTTCTGGATGTT-GAAGTAG 59119 Query 82642 AT-AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700 | || | | || ||||| || ||||| || || ||||| || || || |||||||| Sbjct 59118 CTCAGGGTACGTCCATCTTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGG 59059 Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 || || || || | || || || || ||||| || || || ||||| ||| | || || Sbjct 59058 GGAATGCCCTCTCTGTCCTGGATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCA 58999 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | ||| || || ||||| || | |||||||| || |||||||| Sbjct 58998 ACTTCAAGAGTGATAGTTTTGCCAGTGAGGGTCTTTACGAAAATCTGCAT 58949 >seq37094 Length=33869 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||||||||||||||| || || |||||||| || |||||| |||||| || Sbjct 25391 ATACCTTCCTTATCTTGAATCTTGGCCTTGACATTTTCTATGGTATCAGAAGGTTCCACC 25332 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || || | || || ||||| |||||||| Sbjct 25331 TCTAGGGTGATAGTCTTACCCGTGAGGGTTTTCACAAAAATCTGCAT 25285 >seq118296 Length=32322 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||||||||||||||| || || |||||||| || ||||| |||||| || Sbjct 19420 ATACCTTCCTTATCTTGAATCTTGGCCTTGACATTTTCTATGGTATCGGAAGGTTCCACC 19479 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || || | || || ||||| |||||||| Sbjct 19480 TCTAGGGTGATAGTCTTACCCGTGAGGGTTTTCACAAAAATCTGCAT 19526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979457103809973