Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11]
188,407 sequences; 1,026,046,400 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq159113 113 1e-19
seq176294 107 5e-18
seq166919 96.9 8e-15
seq88483 95.1 3e-14
seq44755 91.5 3e-13
seq177713 87.8 4e-12
>seq159113
Length=23055
Score = 113 bits (124), Expect = 1e-19
Identities = 146/198 (74%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCTGACACAGTCGAA 206241
|| || ||||| || ||||| ||||| | ||||| || |||| ||||| |||||
Sbjct 22802 AAGACCCTCACTGGCAAAACTATCACCCTCGAAGTTGAGCCAAGT---GACACGATCGAA 22858
Query 206242 TCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTAT 206300
|| ||||| ||| || || || ||||| || ||| || ||| || || |||||
Sbjct 22859 AACGTCAAAGCCAAA-ATCCAGGACAAAGAGGGCATTCCCCCAGACCAGCAGAGGCTTAT 22917
Query 206301 CTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360
||||||||| || ||| |||| |||||| | || || ||| |||||| ||||||||||
Sbjct 22918 CTTCGCCGGCAAACAGCTGGAGGATGGACGTACCCTGAGCGACTACAACATCCAGAAAGA 22977
Query 206361 GTCTACTCTTCACCTTGT 206378
|| ||||||||||| ||
Sbjct 22978 ATCCACTCTTCACCTGGT 22995
Score = 107 bits (118), Expect = 5e-18
Identities = 139/188 (74%), Gaps = 8/188 (4%)
Strand=Plus/Plus
Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCTGACACAGTCGAATCAGT-AAAG 206250
|||||||||||||||| | ||||| || ||| |||||| ||||| || ||||
Sbjct 22584 CAGGAAAAACGATCACCCTCGAAGTTGAGCCAAG---TGACACGATCGAAAACGTCAAAG 22640
Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310
| ||| || || || ||||| || ||| || ||| || || ||||||||||||||
Sbjct 22641 CCAAA-ATCCAGGACAAAGAGGGCATTCCCCCAGACCAGCAGAGGCTTATCTTCGCCGGC 22699
Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370
|| ||| |||| |||||| | || || || |||||| |||||||||| || ||||||
Sbjct 22700 AAACAGCTGGAGGATGGACGTACCCTGAGTGACTACAACATCCAGAAAGAATCCACTCTT 22759
Query 206371 CACCTTGT 206378
|| || ||
Sbjct 22760 CATCTGGT 22767
Score = 98.7 bits (108), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 9/230 (4%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA- 206222
|||||| ||||| || ||| || || || || || || || ||| | || |||||
Sbjct 22081 AAAATG---CAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACTCTCGAGGTGGAG 22137
Query 206223 --AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280
|||| |||||| |||| |||||| ||||||||| || ||||| || |||
Sbjct 22138 CCAAGT---GACACAATCGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCC 22194
Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340
|| ||| || || || |||||||| ||||| || | |||||||| | ||| | |
Sbjct 22195 CCTGACCAGCAGAGGCTAATCTTCGCTGGAAAACAACTTGAAGATGGTCGCACTCTTAGC 22254
Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|| ||||| |||| || || ||||||||||| | || ||| | |||||
Sbjct 22255 GACTACAATATCCAAAAGGAATCTACTCTTCATTTGGTGTTGCGCCTTCG 22304
>seq176294
Length=1487
Score = 107 bits (118), Expect = 5e-18
Identities = 139/188 (74%), Gaps = 8/188 (4%)
Strand=Plus/Plus
Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCTGACACAGTCGAATCAGT-AAAG 206250
|||||||||||||||| | ||||| || ||| |||||| ||||| || ||||
Sbjct 1263 CAGGAAAAACGATCACCCTCGAAGTCGAGCCAAG---TGACACGATCGAAAACGTCAAAG 1319
Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310
| ||| || || || ||||| || ||| || ||| || || ||||||||||||||
Sbjct 1320 CCAAA-ATCCAGGACAAAGAGGGCATTCCCCCAGACCAGCAGAGGCTTATCTTCGCCGGC 1378
Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370
|||||| | || |||||| | || || ||| |||||| |||||||||| || || |||
Sbjct 1379 AAGCAGCTTGAGGATGGACGTACCCTGAGCGACTACAACATCCAGAAAGAATCCACCCTT 1438
Query 206371 CACCTTGT 206378
|| || ||
Sbjct 1439 CATCTGGT 1446
Score = 104 bits (114), Expect = 6e-17
Identities = 162/230 (70%), Gaps = 9/230 (4%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA- 206222
|||||| ||||| || ||| || || || || || || || ||| | || |||||
Sbjct 797 AAAATG---CAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACTCTCGAGGTGGAG 853
Query 206223 --AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280
|||| ||||| |||| |||||| ||||||||| || ||||| || |||
Sbjct 854 CCAAGT---GACACCATCGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCC 910
Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340
|| ||| || ||||| |||||||| ||||| || | |||||||| | ||| | |
Sbjct 911 CCTGACCAGCAGAGACTGATCTTCGCTGGAAAACAACTTGAAGATGGTCGCACTCTTAGC 970
Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||| |||| || || ||||||||||| | || ||| | |||||
Sbjct 971 GACTACAACATCCAAAAGGAATCTACTCTTCATTTGGTGTTGCGCCTTCG 1020
>seq166919
Length=61529
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/211 (72%), Gaps = 10/211 (5%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTC 206228
||||| ||| | ||| || ||||| || ||||| |||||| | ||||| || ||||
Sbjct 58952 CAGAT-TTTCGTAAAGACCCTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT-- 59008
Query 206229 TGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACG 206287
||||| |||| || ||||| ||| || || || | ||| || ||| || ||
Sbjct 59009 -GACACGATCGAGAACGTCAAAGCCAAA-ATCCAGGACAGAGAGGGCATTCCCCCAGATC 59066
Query 206288 CTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACA 206347
|| || |||||||||||||| || ||| ||||||||||| | || || | | | ||
Sbjct 59067 AGCAGAGGCTTATCTTCGCCGGCAAACAGCTGGAAGATGGACGTACCCTGAGCTACTTCA 59126
Query 206348 ACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378
|| |||||||||| || || |||||||| ||
Sbjct 59127 ACATCCAGAAAGAATCCACCCTTCACCTGGT 59157
>seq88483
Length=20907
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| || || ||||| || ||||| | || || ||| |||
Sbjct 644 CAGATTTTTGTGAAAACACTTACTGGAAAGACTATCACACTCGAGGTCGAACCCAGTGAT 585
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| ||||| || ||| ||||| || || || ||||| || || ||| ||
Sbjct 584 ACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCCGACCAGCAG 525
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||||||||| || ||| |||| ||||| | ||| || ||| |||||| ||
Sbjct 524 AGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACTCTGAGCGACTACAACATC 465
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| ||||||||||| ||
Sbjct 464 CAGAAGGAGTCTACTCTGCA 445
>seq44755
Length=507
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || ||||| ||||||| || ||||| ||||
Sbjct 409 AAAACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGCGACACCATCGAGAAC 350
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| || || ||| || || || ||||||
Sbjct 349 GTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGAGGCTGATCTTC 290
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||| ||||| | ||| || ||| |||||| ||||||| || ||
Sbjct 289 GCCGGCAAGCAGCTGGAGGATGGTCGTACTCTGAGCGACTACAACATCCAGAAGGAATCC 230
Query 206365 ACTCTTCACCTTGTT 206379
|| || |||||||||
Sbjct 229 ACGCTCCACCTTGTT 215
>seq177713
Length=14691
Score = 87.8 bits (96), Expect = 4e-12
Identities = 145/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || || ||||| ||||||| || |||
Sbjct 93 CAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGCGAC 152
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| ||||| || ||||| || ||| || || || ||||| || || ||| ||
Sbjct 153 ACGATCGAAAACGTGAAAGCCAA-GATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCA 211
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| || ||||||||||| || ||| |||| ||||| | ||| || ||| |||||| |
Sbjct 212 GAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACTCTGAGCGACTACAACAT 271
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||| || || || || ||||||||
Sbjct 272 CCAGAAGGAATCCACGCTCCACCTTGT 298
Score = 86.0 bits (94), Expect = 1e-11
Identities = 138/197 (70%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCTGACACAGTCGAA 206241
|| || || || || || || ||||| ||||||| || ||| ||||| ||||
Sbjct 1344 AAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCAAGC---GACACGATCGAG 1400
Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301
|| ||| ||||| || || || ||||| || || ||| || || || |||
Sbjct 1401 AACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGAGGCTGATC 1460
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|||||||| || ||| |||| ||||| | ||| || ||| |||||| ||||||| ||
Sbjct 1461 TTCGCCGGCAAACAGCTGGAGGATGGCCGTACTCTGAGCGACTACAACATCCAGAAGGAA 1520
Query 206362 TCTACTCTTCACCTTGT 206378
||||| || ||||||||
Sbjct 1521 TCTACGCTCCACCTTGT 1537
Score = 84.2 bits (92), Expect = 5e-11
Identities = 129/184 (70%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254
|||| || || ||||| ||||||| || ||||| |||| || ||| |
Sbjct 1126 CAGGCAAGACCATCACCCTGGAAGTTGAGCCCAGCGACACGATCGAGAACGTGAAGGCCA 1185
Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314
|||| || || || ||||| || || ||| || || || ||||||||||| || |
Sbjct 1186 AGATCCAGGATAAGGAAGGCATCCCTCCCGACCAGCAGAGGCTGATCTTCGCCGGCAAAC 1245
Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374
|| |||| ||||| | ||| || ||| |||||| ||||||| || || || |||||||
Sbjct 1246 AGCTGGAGGATGGTCGTACTCTGAGCGACTACAACATCCAGAAGGAATCGACGCTTCACC 1305
Query 206375 TTGT 206378
||||
Sbjct 1306 TTGT 1309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178967926321847
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |