Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq26467 120 3e-22 seq88483 116 3e-21 seq44755 111 1e-19 seq165127 100 3e-16 seq176294 98.7 9e-16 seq159113 98.7 9e-16 seq166784 96.9 3e-15 seq44752 95.1 1e-14 seq92079 86.0 6e-12 >seq26467 Length=1226 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||| |||||| || |||||||| ||| || || || |||| ||| Sbjct 792 ACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCCTCC 733 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| || || || ||||||| || ||||||||| | ||| | | ||||||||| | Sbjct 732 AGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGG 673 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | | || || || | ||| ||||| | ||||| || || Sbjct 672 ATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTCTTT 613 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||||||||||| |||||||| Sbjct 612 CCAGTAAGTGTTTTCACAAAAATCTGCAT 584 >seq88483 Length=20907 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||| |||||| || |||||||| ||| || || || | || ||| Sbjct 439 ACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCC 498 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| || || || || |||| || ||||||||| | ||| | | ||||||||| | Sbjct 499 AGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGG 558 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | || | | || || || | ||| ||||| | ||||| || || Sbjct 559 ATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTCTTT 618 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||||||||||| |||||||| Sbjct 619 CCAGTAAGTGTTTTCACAAAAATCTGCAT 647 >seq44755 Length=507 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||| || || || | || ||||||||||| || || || Sbjct 234 TCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGCTTGCCGGCGAAG 293 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||| | || ||||||||| |||||| ||||| | Sbjct 294 ATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 353 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | || || |||| ||||| || || || |||| |||||||| Sbjct 354 TCGATGGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACG 413 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 414 AAGATCTGCAT 424 >seq165127 Length=29611 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||| || | |||||||||||||| |||||||| || | Sbjct 22088 CCACCACGCAGACGCAACACCAAGTGGAGAGTACTCTCCTTTTGGATGTTGTAGTCACTC 22029 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 | ||| || | || ||||||||||| || ||||| ||||||| ||||||||| Sbjct 22028 AGGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTC 21976 >seq176294 Length=1487 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | |||||||||||| | ||| |||||||| |||||||| || | Sbjct 1028 TTCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTC-G 970 Query 35568 CCAAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | ||| || || | || || || || || || || || |||| | ||||||||| | Sbjct 969 CTAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGG 910 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 |||| | ||| |||||| |||||| ||| | | | | | ||||| || | ||| Sbjct 909 GGAATACCCTCTTTGTCCTGAATCTTTGCCTTTACATTCTCGATGGTGTCACTTGGCTCC 850 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| | || || || || || || | || || || || ||||||||| Sbjct 849 ACCTCGAGAGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATT 799 >seq159113 Length=23055 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | |||||||||||| | ||| |||||||| || ||||| || | Sbjct 22312 TTCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTC-G 22254 Query 35568 CCAAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | ||| || || | || || || || || || || || || | || ||||||||| | Sbjct 22253 CTAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGG 22194 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 |||| | ||| |||||| |||||| ||| | | | | | ||||| || | ||| Sbjct 22193 GGAATACCCTCTTTGTCCTGAATCTTTGCCTTTACATTCTCGATTGTGTCACTTGGCTCC 22134 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| | || || || || || |||| || || || || ||||||||| Sbjct 22133 ACCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 22083 >seq166784 Length=39261 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||| || | || |||||||| || |||||||| ||| | Sbjct 568 CCACCACGCAGGCGCAACACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 627 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 | ||| || | || ||||||||||| || ||||| ||||||| ||||||||| Sbjct 628 AGGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTC 680 >seq44752 Length=2393 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 44187 CGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCGCGCTCGTT 44246 || ||||| ||| ||||||||| |||| ||| | ||| | || |||| || || | | Sbjct 2210 CGCATGTACTGGGCCAAGAAGATTCTGGAATGGACTGAATCTCCGGAAACAGCTCTGGCT 2269 Query 44247 CATGCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTA 44306 ||| ||||||||||||||||||||||||||||| || ||||| |||| || || || Sbjct 2270 ACTGCGATCTATCTGAACGACAAGTACAGTTTGGATGGACGCGATCCCAGTGGCTATGTT 2329 Query 44307 GG 44308 || Sbjct 2330 GG 2331 >seq92079 Length=17510 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 44187 CGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCGCGCTCGTT 44246 || ||||| ||| |||||| || |||| ||| | ||| | | ||||||| || | | Sbjct 1989 CGCATGTACTGGGCCAAGAAAATTCTGGAATGGACTGAATCTCCTGAAACCGCTCTGGCT 2048 Query 44247 CATGCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTA 44306 ||| ||||| ||||||||||||||||||||||| || ||||| |||| || || || Sbjct 2049 ACTGCGATCTACCTGAACGACAAGTACAGTTTGGATGGGCGCGATCCCAGTGGTTATGTG 2108 Query 44307 GG 44308 || Sbjct 2109 GG 2110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449731941627560