Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq159113 127 2e-24 seq166919 118 9e-22 seq26467 114 1e-20 seq177713 113 4e-20 seq88483 102 7e-17 seq50026 95.1 1e-14 seq14326 91.5 1e-13 seq44752 84.2 2e-11 >seq159113 Length=23055 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | |||||||| || ||||| || Sbjct 22084 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATTACTCTCGAGGTGGAGCCAAGT 22143 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||| ||||| |||||||| || || || || || || Sbjct 22144 GACACAATCGAGAATGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCCCCTGACCAG 22203 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | |||| | ||| || |||||| | ||||| || || || ||| ||||| Sbjct 22204 CAGAGGCTAATCTTCGCTGGAAAACAACTTGAAGATGGTCGCACTCTTAGCGACTACAAT 22263 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | |||||||| ||||| | || ||||| || Sbjct 22264 ATCCAAAAGGAATCTACTCTTCATTTGGTGTTGCGCCTTCGTGGTGGAAT 22313 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || ||||| |||| || || ||||| || || Sbjct 22787 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAAACTATCACCCTCGAAGTTGAGCCAAGT 22846 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | |||||| ||||| || |||||||| ||||| || || || || Sbjct 22847 GACACGATCGAAAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 22906 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||||||| |||| || | ||| | ||| |||||| Sbjct 22907 CAGAGGCTTATCTTCGCCGGCAAACAGCTGGAGGATGGACGTACCCTGAGCGACTACAAC 22966 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | || |||| ||||| |||| ||||| || Sbjct 22967 ATCCAGAAAGAATCCACTCTTCACCTGGTCCTGCGTCTGCGTGGTGGTAT 23016 >seq166919 Length=61529 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || || || ||||| |||| ||||||||||| || || Sbjct 58949 ATGCAGATTTTCGTAAAGACCCTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT 59008 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| |||||| ||||| || |||| ||| ||||| || || ||||| Sbjct 59009 GACACGATCGAGAACGTCAAAGCCAAAATCCAGGACAGAGAGGGCATTCCCCCAGATCAG 59068 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||||||| ||||||| | ||| | | | | |||| Sbjct 59069 CAGAGGCTTATCTTCGCCGGCAAACAGCTGGAAGATGGACGTACCCTGAGCTACTTCAAC 59128 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||| | || |||| | ||| |||| ||||| || Sbjct 59129 ATCCAGAAAGAATCCACCCTTCACCTGGTCCTTCGTCTGCGTGGTGGTAT 59178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || | || ||||| |||| ||||||||||| || || Sbjct 59177 ATGCAGATTTTCGTGAAGACCGTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT 59236 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| |||||| ||||| || |||||||| ||||| || || ||||| Sbjct 59237 GACACGATCGAGAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGATCAG 59296 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | | || | ||||||||| || |||| || Sbjct 59297 CAGAGGCTTATCTTCGCCGGCAAGCAGCTGGAGGA 59331 >seq26467 Length=1226 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || || || ||| |||| || || || || ||||| Sbjct 583 CATGCAGATTTTTGTGAAAACACTTACTGGAAAGACTATCACACTCGAGGTCGAACCCAG 642 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || |||| || || || || || ||||| ||||| || || ||||| || Sbjct 643 TGATACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCCGACCA 702 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | |||| |||||||||||| |||| ||| || || | ||| ||||| Sbjct 703 GCAGAGGCTGATATTCGCCGGCAAACAGCTGGAGGACGGTCGTACTCTGAGCGACTACAA 762 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | |||||||| | || |||| ||||| || Sbjct 763 CATCCAGAAGGAGTCTACTCTGCATTTGGTCCTTCGCCTGCGCGGTGGTAT 813 >seq177713 Length=14691 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| | || || || ||||| || || | Sbjct 90 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGC 149 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || ||| || || || ||||| |||||||| || ||||| || Sbjct 150 GACACGATCGAAAACGTGAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 209 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||||||| |||| || || || | ||| |||||| Sbjct 210 CAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACTCTGAGCGACTACAAC 269 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || | || | || ||||| |||||||| Sbjct 270 ATCCAGAAGGAATCCACGCTCCACCTTGTGCTTCGCTTGCGCGGTGGCAT 319 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| |||||| | || || || ||||| || || | Sbjct 1329 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCAAGC 1388 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || ||||| |||||||| || ||||| || Sbjct 1389 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 1448 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||||||| |||| || | || | ||| |||||| Sbjct 1449 CAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGCCGTACTCTGAGCGACTACAAC 1508 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || | || | || ||||| ||||| || Sbjct 1509 ATCCAGAAGGAATCTACGCTCCACCTTGTGCTTCGCTTGCGCGGTGGTAT 1558 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || || || ||||| || || Sbjct 317 CATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCAAG 376 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| |||| || ||| || || || || || |||||||| || ||||| || Sbjct 377 CGACACGATCGAGAACGTGAAAGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCA 436 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | | || | |||||||||||| |||| || Sbjct 437 GCAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGA 472 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27015 GGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAA 27074 |||||| | || || || ||||| || || |||| |||| |||| || || || Sbjct 1128 GGCAAGACCATCACCCTGGAAGTTGAGCCCAGCGACACGATCGAGAACGTGAAGGCCAAG 1187 Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134 || || || || |||||||| || ||||| || ||| | | || | |||||||||||| Sbjct 1188 ATCCAGGATAAGGAAGGCATCCCTCCCGACCAGCAGAGGCTGATCTTCGCCGGCAAACAG 1247 Query 27135 TTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTG 27194 |||| || || || | ||| |||||||| || ||||| ||||| | || | Sbjct 1248 CTGGAGGATGGTCGTACTCTGAGCGACTACAACATCCAGAAGGAATCGACGCTTCACCTT 1307 Query 27195 GTTTTGCGTTTGCGGGGTGGCAT 27217 || | || ||||| ||||| || Sbjct 1308 GTGCTTCGCTTGCGCGGTGGTAT 1330 >seq88483 Length=20907 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || || || ||| |||| || || || || ||||| Sbjct 648 CATGCAGATTTTTGTGAAAACACTTACTGGAAAGACTATCACACTCGAGGTCGAACCCAG 589 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | || || || || || ||||| ||||| || || ||||| || Sbjct 588 TGATACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCCGACCA 529 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||||||||| |||| || || || | ||| ||||| Sbjct 528 GCAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACTCTGAGCGACTACAA 469 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | |||||||| | || |||| ||||| || Sbjct 468 CATCCAGAAGGAGTCTACTCTGCATTTGGTCCTTCGCCTGCGCGGTGGTAT 418 >seq50026 Length=5431 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || ||||| |||| ||||||||||| || || Sbjct 677 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT 736 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| |||||| ||||| || |||||||| ||||| || || || || Sbjct 737 GACACGATCGAGAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 796 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | | || | ||||||||| || |||| || Sbjct 797 CAGAGGCTTATCTTCGCCGGCAAGCAGCTGGAGGA 831 >seq14326 Length=16399 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || ||||| |||| ||||||||||| || || Sbjct 10522 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAAACTATCACTCTTGAAGTTGAGCCAAGT 10463 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| |||||| ||||| || |||||||| ||||| || || | || Sbjct 10462 GACACGATCGAGAACGTCAAAGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGGCCAG 10403 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | | || | ||||||||| || |||| || Sbjct 10402 CAGAGGCTTATCTTCGCCGGCAAGCAGCTGGAGGA 10368 >seq44752 Length=2393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 135506 GAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCT 135565 || ||||| ||||| |||||| | |||||||| ||||| || ||||| |||||||| || Sbjct 2186 GAGGGCAAGATGCATGGATTTCTACGCATGTACTGGGCCAAGAAGATTCTGGAATGGACT 2245 Query 135566 GCATCGCCTGCAGAGGCGCTA-CAACACGCAATATTTTTTAATGATTACTACAGTTTAGA 135624 | ||| || | | || || | || || || | | | || || | |||||||| || Sbjct 2246 GAATCTCCGGAAACAGCTCTGGCTACT-GCGATCTATCTGAACGACAAGTACAGTTTGGA 2304 Query 135625 TGGACGCGATTCAAATGGCTACGTAGGT 135652 |||||||||| | | |||||| || ||| Sbjct 2305 TGGACGCGATCCCAGTGGCTATGTTGGT 2332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433922928536951