Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq44755 149 1e-30 seq177713 140 8e-28 seq176294 127 5e-24 seq159113 127 5e-24 seq88483 125 2e-23 seq94379 116 9e-21 seq26467 113 1e-19 seq166919 93.3 1e-13 >seq44755 Length=507 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| |||||||| || |||| ||||| ||| || ||| | ||||| Sbjct 213 AGAACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCC 272 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | || |||||||| || || ||||||||||| Sbjct 273 TCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 332 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || || || || | ||||| ||| Sbjct 333 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTC 392 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||||| | ||| | ||||| Sbjct 393 TTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 424 Score = 111 bits (122), Expect = 4e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 225518 TGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAG 225577 ||||||| || |||| ||||| ||| || ||| | ||||| || ||||| || |||| Sbjct 1 TGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAG 60 Query 225578 CGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCA 225637 ||||||| || | || |||||||| || || |||||||| || |||||||| ||||| Sbjct 61 CGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCA 120 Query 225638 CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTT 225697 | ||||| ||||| | || || || | ||||| |||||||| |||| || | Sbjct 121 CGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCT 180 Query 225698 TTATGAACACTTGCAT 225713 | | ||| | ||||| Sbjct 181 TCACGAAGATCTGCAT 196 >seq177713 Length=14691 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||||||||||| |||| ||||| ||| || ||| | ||||| Sbjct 1768 AGCACAAGGTGGAGCGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCC 1709 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| || | || |||||||| || || ||||||||||| Sbjct 1708 TCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 1649 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| | || || || | ||||| ||| Sbjct 1648 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTC 1589 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 1588 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1557 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| |||||||| || |||| ||||| ||| || ||| | ||||| Sbjct 301 AGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCC 242 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || | || |||||||| || || ||||||||||| Sbjct 241 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 182 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||| |||||| ||||| || || || || | ||||| ||| Sbjct 181 TGGATCTTGGCTTTCACGTTTTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTC 122 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 121 TTGCCAGTCA 112 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || ||||| || |||| ||||| ||| || ||| | ||||| Sbjct 1540 AGCACAAGGTGGAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCC 1481 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || | || |||||||| || || ||||||||||| Sbjct 1480 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 1421 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| | || || || | ||||| ||| Sbjct 1420 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTC 1361 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 1360 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1329 Score = 107 bits (118), Expect = 5e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || ||||| || |||| ||||| ||| || ||| | ||||| Sbjct 2102 AGCACAAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCC 2043 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || | || |||||||| || || |||||||| || Sbjct 2042 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCC 1983 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| |||||| ||||| ||||| Sbjct 1982 TGGATCTTGGCCTTCACGTTCTCGATCGTGTC 1951 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 225557 CATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCT 225616 |||| || ||||| || || |||||||| || | || |||||||| || || ||||||| Sbjct 1096 CATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCT 1037 Query 225617 TGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676 |||| |||||||| |||||| ||||| ||||| || || || || | |||| Sbjct 1036 TGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGA 977 Query 225677 TCGTCTTGCC 225686 | |||||||| Sbjct 976 TGGTCTTGCC 967 >seq176294 Length=1487 Score = 127 bits (140), Expect = 5e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || ||||| ||||| ||||||| ||||| ||| | ||| Sbjct 1021 ACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTAAGAGT 962 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || ||||||||||| |||| || ||||| || |||||||| Sbjct 961 GCGACCATCTTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGGGGGAATACC 902 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||| || |||||| ||| ||| ||||||||||| | ||||| || | Sbjct 901 CTCTTTGTCCTGAATCTTTGCCTTTACATTCTCGATGGTGTCACTTGGCTCCACCTCGAG 842 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||||||| || | || || | ||| | |||||||| Sbjct 841 AGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCATTTT 797 Score = 107 bits (118), Expect = 5e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| || || || ||||||||||| |||| ||||| ||| || || Sbjct 1459 ACGCAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGGGT 1400 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || ||||||||||| | || ||||| || ||||| || Sbjct 1399 ACGTCCATCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCC 1340 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || ||||| ||||| ||| || || || |||||| ||||| | || || || | Sbjct 1339 CTCTTTGTCCTGGAT-TTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCGACTTCGA 1281 Query 225671 ACGTGATCGTCTTGCC 225686 |||||||| || || Sbjct 1280 GGGTGATCGTTTTTCC 1265 >seq159113 Length=23055 Score = 127 bits (140), Expect = 5e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || ||||| ||||| ||||||| |||||| ||| | ||| Sbjct 22305 ACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTAAGAGT 22246 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || ||||||||||| || | || ||||| || |||||||| Sbjct 22245 GCGACCATCTTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGGGGGAATACC 22186 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||| || |||||| ||| ||| ||||| ||||| | ||||| || | Sbjct 22185 CTCTTTGTCCTGAATCTTTGCCTTTACATTCTCGATTGTGTCACTTGGCTCCACCTCGAG 22126 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||||||| |||| || || | ||| | |||||||| Sbjct 22125 AGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATTTT 22081 Score = 116 bits (128), Expect = 9e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| ||||| |||||||||||||| |||| ||||| ||| || || Sbjct 23008 ACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGGGT 22949 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| || || ||||||||||| | || ||||| || ||||| || Sbjct 22948 ACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCC 22889 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || ||||| ||||| ||| || || || |||||| ||||| | || || || | Sbjct 22888 CTCTTTGTCCTGGAT-TTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACTTCGA 22830 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | || || | ||| | ||||| Sbjct 22829 GGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 Score = 104 bits (114), Expect = 6e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| || || |||||||||||||| |||| ||||| || || || Sbjct 22780 ACGCAGACGCAGGACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCACTCAGGGT 22721 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| || || ||||||||||| | || ||||| || ||||| || Sbjct 22720 ACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATGCC 22661 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || ||||| ||||| ||| || || || |||||| ||||| | || || || | Sbjct 22660 CTCTTTGTCCTGGAT-TTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAACTTCGA 22602 Query 225671 ACGTGATCGTCTTGCC 225686 |||||||| || || Sbjct 22601 GGGTGATCGTTTTTCC 22586 >seq88483 Length=20907 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || ||||| || || || |||| ||||| ||| || ||| | ||||| Sbjct 436 AGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCC 495 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || | || |||||||| || |||||||||||||| Sbjct 496 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCC 555 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||| || || ||| || || | ||||| ||| Sbjct 556 TGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTC 615 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || || | ||||| Sbjct 616 TTTCCAGTAAGTGTTTT 632 >seq94379 Length=7077 Score = 116 bits (128), Expect = 9e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| |||||||| || |||| ||||| ||| || ||| | ||||| Sbjct 6924 AGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCC 6983 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || | || |||||||| ||||| ||||||||||| Sbjct 6984 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC 7043 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| ||||| ||||| ||||| Sbjct 7044 TGGATCTTGGCTTTCACGTTCTCGATCGTGTC 7075 >seq26467 Length=1226 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || ||||| || || || |||| ||||| ||| || ||| | || || Sbjct 795 AGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCC 736 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || ||||| || || | || |||||||| || |||||||||||||| Sbjct 735 TCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCC 676 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||| || || ||| || || | ||||| ||| Sbjct 675 TGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTC 616 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || || | ||||| Sbjct 615 TTTCCAGTAAGTGTTTT 599 >seq166919 Length=61529 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||||||||| |||| ||| | | | || || | |||||| Sbjct 59160 AGGACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGAAGTAGCTCAGGGTACGTCCATCT 59101 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || ||||||||||| | || || || || ||||| || || |||| Sbjct 59100 TCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGAATGCCCTCTCTGTCC 59041 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || || || ||||| ||||| | || || || | ||||| || Sbjct 59040 TGGAT-TTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAACTTCAAGAGTGATAGT 58982 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || |||| ||| | ||||| Sbjct 58981 TTTGCCAGTGAGGGTCTTTACGAAAATCTGCAT 58949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1189652471794458