Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq28574 1157 0.0 >seq28574 Length=9403 Score = 1157 bits (1282), Expect = 0.0 Identities = 1382/1872 (74%), Gaps = 8/1872 (0%) Strand=Plus/Minus Query 53469 ATGGATCTCTATCAACAATATATTCACATCTCGCGCTATTCACGTTGGCGCGATGACTTG 53528 ||||| || || || |||||||| ||||| || || ||||| || |||||||| ||| || Sbjct 9294 ATGGACCTGTACCAGCAATATATCCACATTTCCCGTTATTCTCGCTGGCGCGACGACCTG 9235 Query 53529 GGGCGGCGCGAGACTTGGGAGGAAACGGTCCAGCGCTATATCGACTTCTTCGACAAGCGC 53588 || || || || || ||| || || || ||||| |||||||||||||| || |||| Sbjct 9234 GGCCGCCGGGAAACCTGGCCCGAGACCGTGCAGCGTTATATCGACTTCTTTAACGAGCGA 9175 Query 53589 ACGAAGCACCAGTTCAGCGAGGTGCTCCAGGGCAAGGTGAAGAACGCGATCCTCGAGCTC 53648 ||| ||| | ||| || || | || |||||| | || ||||| | || Sbjct 9174 ACGGCCGGTAAGTATACCGACGTCCTTAACGGGAAGGTGCGCGAAGCTATCCTGGGCCTG 9115 Query 53649 AAGGTCATGCCCTCTATGCGTGCCCTGATGACTGCCGGTGAGGCTCTGGAGCGTGAGAAC 53708 | || ||||| || ||||| ||||| ||||| || || || ||||| || |||||| Sbjct 9114 GACGTTATGCCGTCAATGCGCGCCCTAATGACCGCAGGCCCTGCCCTGGAACGCGAGAAC 9055 Query 53709 CTTGCGGGGTTCAACTGTTCCTATCTGGCGATCAACACGAAGCGTTCGTTCGCCGAGGCC 53768 || || || || ||||| || || ||||||||||| || ||||| ||||||||||| || Sbjct 9054 CTGGCCGGCTTTAACTGCTCATACCTGGCGATCAATACTAAGCGGTCGTTCGCCGAAGCG 8995 Query 53769 CTCTATATCCTCATGTGTGGCACTGGTGTCGGGTTCAGCTGCGAGCGCCAGGAAGTCACC 53828 || ||||| || ||||| || || || || |||||| ||||||||||||||| | | Sbjct 8994 CTTTATATTCTTATGTGCGGTACCGGCGTGGGGTTCTCCTGCGAGCGCCAGGAGATAGCA 8935 Query 53829 AAGCTGCCCGCCGTGCCTGACGAACTGCTCAACACCGACGACACCATCGTCGTGGCAGAC 53888 || | || | || || || || ||| || ||||||| || |||||||| |||||| Sbjct 8934 AAATTACCACCGGTACCCGAAGAGCTGGAAAAGTCCGACGATACGATCGTCGTAGCAGAC 8875 Query 53889 TCGAAGGAAGGCTGGGCGAAGGCCTACCATGCACTCCTCGGGCATCTGTGGAACGGTGAC 53948 |||| |||||||||||||| ||||| || || || ||| |||| |||||||| Sbjct 8874 AGTAAGGGCGGCTGGGCGAAGGCGTACCACGCGCTGCTGGGGTATCTTTGGAACGGCACT 8815 Query 53949 ATCCCGAAAGTCGATTACAGCAAGGTCCGGCCCGCCGGTGCGCGCCTCAAGATCTTCGGC 54008 || ||||||||||| || ||| || || || ||| | | || ||| | |||||| Sbjct 8814 ATACCGAAAGTCGACTATTCACGGGTTCGACCTGCAGGTACCAGGCTTAAGGTATTCGGC 8755 Query 54009 GGTCGTGCTTCGGGCCCGGAGCCGCTCAAGCGTCTGTTCAAATTCACCGTCGATACCTTC 54068 || ||||||||||| || || || || ||||| |||||| || || ||||||| |||| Sbjct 8754 GGCCGTGCTTCGGGTCCAGACCCACTTAAGCGCCTGTTCCTGTTTACTGTCGATATCTTC 8695 Query 54069 CAGCGCGCGAAAGGTCGCAAGCTGAACAGCATCGAGGTTCATGACCTGCTGTGCATGATC 54128 ||| || ||||| ||||| || |||||| | || || || ||||| ||||||||||| Sbjct 8694 CAGAATGCCAAAGGCCGCAAACTTAACAGCCTGGAAGTACACGACCTTATGTGCATGATC 8635 Query 54129 GGTGAGATCGTCGTGGTGGGCGGTGTGCGTCGCAGTGCGCTCATCAGTCTGTCGAACCTG 54188 || ||||| ||||| || || || || ||||| ||||| || ||||| || || ||| Sbjct 8634 GGCGAGATTGTCGTCGTAGGTGGCGTACGTCGTAGTGCACTTATCAGCCTTAGCAATCTG 8575 Query 54189 TCGGATCAGCGCATGCGTGACGCCAAGGCTGGCCAGTGGTGGAACGACAACCCGCAACGC 54248 || || ||||||||||| ||||| ||||| ||||||||||||| ||| |||||||| || Sbjct 8574 TCAGACCAGCGCATGCGAGACGCAAAGGCCGGCCAGTGGTGGACCGATAACCCGCAGCGG 8515 Query 54249 GGTCTGGCGAACAACTCCGTGGCCTACACCGAGAAGCCGAGCGCCGAGATCTTCATGGAG 54308 || ||||||||||| ||| ||||| |||||||||||| |||| || || ||||| Sbjct 8514 GGGCTGGCGAACAATAGCGTAGCCTATACCGAGAAGCCGTCGTCCGAAATTTTTATGGAA 8455 Query 54309 GAGTGGCTGTCGCTCGTGAAGTCCAAGTCCGGTGAGCGCGGCATCTTCAACCGTCGTGCC 54368 ||||||||| | || || ||||| |||||||| ||||| || |||||||| ||| || Sbjct 8454 GAGTGGCTGGCCCTGGTTAAGTCAAAGTCCGGCGAGCGTGGTATCTTCAATCGTAACGCA 8395 Query 54369 GCTGCTGCACAGGCTTCGCGCTGGGGTCGCCGCTCCAAGGAACTGTCCTACGGCTGCAAC 54428 || || | ||||| |||||||||| || || ||| | || || | |||||||| ||| Sbjct 8394 GCCGCCACCCAGGCCGCGCGCTGGGGCCGTCGGTCCGATAAATTGGCGTACGGCTGTAAC 8335 Query 54429 CCGTGCTCCGAGATCATCCTGCGCGACAAGCAACTCTGCAACCTGTCCGAAGTCGTGATC 54488 ||||||||||| || || |||||||| ||||| |||||||||||||||||||| | ||| Sbjct 8334 CCGTGCTCCGAAATTATTCTGCGCGATAAGCAGCTCTGCAACCTGTCCGAAGTGATTATC 8275 Query 54489 CGTGAAGACGACACGATGGTCACGTTGATGGAGAAGGTCGAGATCGCCACCATCCTGGGC 54548 || |||| || || ||| || || || ||||||||| |||| | ||||||||| Sbjct 8274 CGCGAAGGAGATACCCTGGAAACCCTGCGCGATAAGGTCGAGGTCGCAGCGATCCTGGGC 8215 Query 54549 ACCCTGCAAGCCACCCTCACCGACTTCAAGTTCGTGTCGGAAGCCTGGGCGCGCAACACT 54608 |||||||| |||||||| ||||||||| |||||| |||||||||||||| | || || Sbjct 8214 ACCCTGCAGGCCACCCTTACCGACTTCGGGTTCGTATCGGAAGCCTGGGCCAGAAATACC 8155 Query 54609 GCCGAGGAAGCTCTGCTGGGCGTCAGCCTGACGGGCATCATGGACAACGCGCTGACCTCC 54668 ||| ||||| || ||||| |||||||| || || || ||||| || | || | ||| Sbjct 8154 CGCGAAGAAGCCCTCCTGGGTGTCAGCCTTACCGGTATTATGGATAATTCCCTTATGTCC 8095 Query 54669 GGCCTGCTGGGCGCCGACAAGCT-CACGCACACGCTCAACAGCATGCGTGACCACGCGCG 54727 || | ||||| || || || || | || ||| | || ||||| || || Sbjct 8094 GGAGCGAAAGGCGCAGAACCCCTGCAGGC-CGTCCTTAACGAACTCCGCGACCATGCCCG 8036 Query 54728 TCTCGTGAATGCCGAGTGGGCGGAAGCTCTGGGCATCAAGCCTTCTGCGGCCATCACTTG 54787 || || || ||||| || ||| | |||||||| || | ||||| || || Sbjct 8035 GGAAGTTAACGCACTCTGGGCCGATCGTCTCGATATCAAGCCGTCGACCGCCATTACGTG 7976 Query 54788 CGTCAAGCCGTCGGGCACCGTGAGCCAGCTCTGCAACACCGCCAGCGGTATCCACGCACG 54847 ||| |||||||| ||||| || |||||||||||||| || |||||||| || || || || Sbjct 7975 CGTTAAGCCGTCCGGCACGGTAAGCCAGCTCTGCAATACGGCCAGCGGCATACATGCCCG 7916 Query 54848 CCACAATCGGAACTATATCCGCACGGTGCGCGTCGATAAGAAGGATCCGCTCTACCAGTT 54907 || ||||| |||||||||||||||| || || || || || || ||||| ||| |||| Sbjct 7915 ACATAATCGCCACTATATCCGCACGGTCCGGGTAGACAAAAAAGACCCGCTTTACGAGTT 7856 Query 54908 CATGAAGGACAAGGGCTTCGTCACCGAAGACGATGTCATGCGTCCGGACAGCACGGCCGT 54967 ||| |||| || |||| ||||||||||| || ||||| || ||||| || || || Sbjct 7855 TATGGAGGAGCGCGGGTTCGCTACCGAAGACGACGTAATGCGGCCCGACAGTACCGCGGT 7796 Query 54968 CGTGAGCTTCGCCATGTCCGCGCCAGATGGTGCTGTGACCCGTGATCAGGTGACTGCGAT 55027 || || ||||| || ||||| | | || ||||| || |||| | || || Sbjct 7795 GGTAAGTTTCGCTATTCAAGCGCCCGCGACGTCGGTAACCCGCGACGAGGTATCGGCTAT 7736 Query 55028 GCAGGCCCTGGAACTGTGGTTACTGTATCAACGTGAGTGGTGTGAGCACAAGCCTTCCGT 55087 ||||||||||| ||||| | ||||| || || || ||||| ||||| || || || | Sbjct 7735 CGAGGCCCTGGAATTGTGGCTCCTGTACCAGCGCGAATGGTGCGAGCATAAACCCTCGAT 7676 Query 55088 CACTGTCACCGTGCGTGACGAGGAATGGCTGTCGGTGGGCGCCTGGGTCTATGAGCACTT 55147 || || || ||||| ||||| ||||||||| || || |||||||| || ||||||| Sbjct 7675 TACCGTTACGGTGCGCGACGACGAATGGCTGGACGTAGGGGCCTGGGTTTACAAGCACTT 7616 Query 55148 CGACGAGGTGTCGGGCATCAGCTTCCTTCCGCATACCGATCACACCTATCAGCAGGCGCC 55207 ||||||||||||||| ||||||||| | ||||||||||| || ||||| ||||||||||| Sbjct 7615 CGACGAGGTGTCGGGTATCAGCTTCTTACCGCATACCGACCATACCTACCAGCAGGCGCC 7556 Query 55208 CTATCAGGACATGACGCCTGAAGAGTTCGCTCAGTGGCAGAAGGAACACCCTGTTCCGGA 55267 || |||||| | || ||||||||| || ||||| || ||||| || |||| Sbjct 7555 GTACCAGGACCTTACCGACGAAGAGTTCCAGCAATGGCAAGCCGAGCACCCAGTCCCGGC 7496 Query 55268 AGTCGATTGGCGTGAGCTCGCCACCTACGAGAAGACGGACAACACCGTGGCGATGCAGAC 55327 || || ||| ||| | | || ||| ||||| ||||| | |||||||| Sbjct 7495 CGTAGACTGGACGGAGTTATC--GGAACTGGAA----GACAATACCGTCGGCATGCAGAC 7442 Query 55328 CTTGGCCTGCAC 55339 | |||||||||| Sbjct 7441 CCTGGCCTGCAC 7430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186870570773952