Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq44755 123 2e-23 seq177713 113 3e-20 seq88483 109 4e-19 seq176294 105 5e-18 seq26467 104 2e-17 seq166784 95.1 9e-15 seq165127 91.5 1e-13 seq159113 91.5 1e-13 >seq44755 Length=507 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| |||||| ||||| ||||||||||| ||| || || | || ||| Sbjct 216 ACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCC 275 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| | |||||| || | ||| | |||||||| ||| Sbjct 276 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 335 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | |||| | ||||||||| || || || |||| || || ||||| Sbjct 336 ATCTTGGCCTTC-ACGTTCTCGATGGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTT 394 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||||||||||| ||||| Sbjct 395 GCCAGTCAGGGTTTTCACGAAGATCTGCAT 424 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| ||| || || | || |||||||| || || || ||| Sbjct 6 TCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCCAGCTGTTTGCCAGCGAAG 65 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| | |||||| || | ||| | |||||||| ||| ||||| |||| | ||| Sbjct 66 ATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTT 124 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || |||||| | || || |||| || || ||||| || || ||||||||||| Sbjct 125 CTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 184 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 185 GAAGATCTGCAT 196 >seq177713 Length=14691 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| |||||| ||||| ||||||||||| ||| || || | || || Sbjct 299 CACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTC 240 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || ||||| ||||||| | |||||| || | ||| | |||||||| ||| Sbjct 239 CAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTG 180 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| || | || |||||| || || || |||| || || ||||| Sbjct 179 GATCTTGGCTTTCACGTTTTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCTT 120 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| ||||| ||||| Sbjct 119 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 90 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| ||||| ||||||||||| ||| || || | || || Sbjct 1538 CACAAGGTGGAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTC 1479 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || ||||| ||||||| | |||||| || | ||| | |||||||| ||| Sbjct 1478 CAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTG 1419 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| |||| | || |||||| | || || |||| || || |||| Sbjct 1418 GATCTTGGCCTTCAC-GTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCT 1360 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || ||||||||||||||||| ||||| Sbjct 1359 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1329 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| |||||| || || ||||||||||| ||| || || | || || Sbjct 1766 CACAAGGTGGAGCGTGGATTCTTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTC 1707 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || || || ||||||| | |||||| || | ||| | |||||||| ||| Sbjct 1706 CAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTG 1647 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| |||| | || |||||| | || || |||| || || |||| Sbjct 1646 GATCTTGGCCTTCAC-GTTCTCGATCGTGTCGCTTGGCTCAACTTCCAGGGTGATGGTCT 1588 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || ||||||||||||||||| ||||| Sbjct 1587 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1557 Score = 86.0 bits (94), Expect = 5e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||||||||| ||||| ||||||||||| ||| || || | || || Sbjct 1310 CACAAGGTGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTC 1251 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || ||||| ||||||| | |||||| || | ||| | |||||||| ||| Sbjct 1250 CAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTG 1191 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| |||| | |||| | || |||||| || || || |||| || || |||| Sbjct 1190 GATCTTGGCCTTC-ACGTTCTCGATCGTGTCGCTGGGCTCAACTTCCAGGGTGATGGTCT 1132 Query 44307 TTCC 44310 | || Sbjct 1131 TGCC 1128 >seq88483 Length=20907 Score = 109 bits (120), Expect = 4e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| ||| || || | || |||||||| || ||||| || Sbjct 456 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAA 515 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| | |||||| || | ||| | ||||||||| ||| ||||| ||||| | Sbjct 516 GATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATT 575 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || || ||| ||||| | || || |||||||| || || || ||||| Sbjct 576 TTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCAC 635 Query 44326 GAAGATTTGCATGAT 44340 || || |||||||| Sbjct 636 AAAAATCTGCATGAT 650 >seq176294 Length=1487 Score = 105 bits (116), Expect = 5e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | |||||||| ||||| || ||||||||||||||||| || Sbjct 1030 CATTCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAGTC 971 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || || || || || || ||||||| | |||||| || | Sbjct 970 GCTAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCAGG 911 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||| || || ||| ||||| ||| | | ||| | |||||||| | | Sbjct 910 GGGAATACCCTCTTTGTCCTGAATCTT-TGCCTTTACATTCTCGATGGTGTCACTTGGCT 852 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | ||||| ||||| || || |||||||| |||||||| ||||| Sbjct 851 CCACCTCGAGAGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 800 >seq26467 Length=1226 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| ||| || || |||| |||||||| || ||||| || Sbjct 775 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCCTCCAGCTGTTTGCCGGCGAA 716 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||| | |||||| || | ||| | ||||||||| ||| ||||| ||||| | Sbjct 715 TATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATT 656 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | ||||| || || ||| ||||| | || || |||||||| || || || ||||| Sbjct 655 CTCGATGGTATCACTGGGTTCGACCTCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCAC 596 Query 44326 GAAGATTTGCATGAT 44340 || || |||||||| Sbjct 595 AAAAATCTGCATGAT 581 >seq166784 Length=39261 Score = 95.1 bits (104), Expect = 9e-15 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | |||||||| ||| || ||||||||||| ||||||||||| ||| Sbjct 568 CCACCACGCAGGCGCAACACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 627 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || || | || ||||||||||| |||||||||||||| | |||||| |||| Sbjct 628 AGGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTG 682 >seq165127 Length=29611 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | |||||||| ||| || || |||||||||||||||||||| || Sbjct 22088 CCACCACGCAGACGCAACACCAAGTGGAGAGTACTCTCCTTTTGGATGTTGTAGTCACTC 22029 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || || | || ||||||||||| |||||||||||||| | |||||| |||| Sbjct 22028 AGGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTG 21974 >seq159113 Length=23055 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | |||||||| ||||| || ||||||||||| ||||| || Sbjct 22314 CATTCCACCACGAAGGCGCAACACCAAATGAAGAGTAGATTCCTTTTGGATATTGTAGTC 22255 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || || || || || || ||||| | | |||||| || | Sbjct 22254 GCTAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAAGATTAGCCTCTGCTGGTCAGG 22195 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||| || || ||| ||||| ||| | | ||| | || ||||| | | Sbjct 22194 GGGAATACCCTCTTTGTCCTGAATCTT-TGCCTTTACATTCTCGATTGTGTCACTTGGCT 22136 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | ||||| ||||| || || |||||||| |||||||| ||||| Sbjct 22135 CCACCTCGAGAGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 22084 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||||||||| ||| || || ||||||||||| || Sbjct 23017 CATACCACCACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 22958 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || |||||||| || ||||| ||||| | | |||||| |||| Sbjct 22957 GCTCAGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGG 22898 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGGATT 44285 || | || || || ||| || || |||| | | || | || ||||| | | Sbjct 22897 GGGAATGCCCTCTTTGTCCTGGAT-TTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCT 22839 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | || || || || || ||||||||||||||||| || ||||| Sbjct 22838 CAACTTCGAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359163786331119