Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydroides_20elegans_20[genbank_20GCA_5F001703475.1_202016-08-11] 188,407 sequences; 1,026,046,400 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq159113 120 3e-22 seq177713 113 4e-20 seq44755 113 4e-20 seq166919 107 2e-18 seq26467 105 6e-18 seq176294 104 2e-17 seq50026 98.7 9e-16 seq166784 95.1 1e-14 seq14326 93.3 4e-14 seq88483 91.5 1e-13 seq165127 86.0 6e-12 seq94379 84.2 2e-11 >seq159113 Length=23055 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| || ||||| ||||| |||||| Sbjct 23013 CCACCACGCAGACGCAGGACCAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGCTC 22954 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||| ||||||||||| || || | ||| ||||| | |||| Sbjct 22953 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22894 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||| |||||| || |||| |||| ||| | | ||||| || | ||| || Sbjct 22893 ATGCCCTCTTTGTCC-TGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAAC 22835 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || ||||| |||||||||||||| Sbjct 22834 TTCGAGGGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 22787 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||||| || ||| || ||||| ||||| ||||| Sbjct 22785 CCACCACGCAGACGCAGGACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCACTC 22726 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||| ||||||||||| || || | ||| ||||| | |||| Sbjct 22725 AGGGTACGTCCATCCTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 22666 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||| |||||| || |||| |||| ||| | | ||||| || | ||| || Sbjct 22665 ATGCCCTCTTTGTCC-TGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCAAC 22607 Query 41815 CTCCACCGTTATCGTTTTACC 41835 || | || |||||||| || Sbjct 22606 TTCGAGGGTGATCGTTTTTCC 22586 >seq177713 Length=14691 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| | || | ||| || || |||||| |||||||| ||||| |||||| Sbjct 317 GCCACCGCGCAAGCGAAGCACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCT 258 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || ||||| ||||||||||| ||||| | ||| ||||| | || Sbjct 257 CAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGG 198 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| || | || |||| ||| | | |||||||| | ||| | Sbjct 197 GATGCCTTCCTTGTCC-TGGATCTTGGCTTTCACGTTTTCGATCGTGTCGCTGGGCTCAA 139 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| || || || || || ||||| ||||| || || |||||||| Sbjct 138 CTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 90 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| | || | ||| || || ||||| |||||||| ||||| |||||| Sbjct 1555 CCACCGCGCAAGCGAAGCACAAGGTGGAGCGTAGATTCCTTCTGGATGTTGTAGTCGCTC 1496 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||| ||||||||||| ||||| | ||| ||||| | || Sbjct 1495 AGAGTACGGCCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 1436 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||||||||| ||| || ||||| | | |||||||| | ||| || Sbjct 1435 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCAACT 1376 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || ||||| ||||| ||||| |||||||| Sbjct 1375 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1329 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41682 TGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCT 41741 |||| |||||| || || || | || || ||||| ||||||||||| ||||| | || Sbjct 498 TGTTGTAGTCGCTCAGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCT 439 Query 41742 GTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTG 41800 | ||||| | || | || ||||| ||| || | || |||| ||| | | ||| Sbjct 438 GCTGGTCGGGAGGGATGCCTTCCTTATCC-TGGATCTTGGCTTTCACGTTCTCGATCGTG 380 Query 41801 TCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGC 41860 ||||| | ||| || |||| || || || || || ||||| ||||| ||||| |||||| Sbjct 379 TCGCTTGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGC 320 Query 41861 ATG 41863 ||| Sbjct 319 ATG 317 >seq44755 Length=507 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| | || | || || || |||||| |||||||| ||||| |||||| Sbjct 198 CCACCGCGCAAGCGAAGAACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTC 257 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||||||||| ||||| | ||| ||||| | || Sbjct 258 AGAGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 317 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||||||||| ||| || ||||| | | |||||||| | ||| || Sbjct 318 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACT 377 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || ||||| || || ||||| |||||||| Sbjct 378 TCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 424 >seq166919 Length=61529 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| || ||||| ||||| ||| | Sbjct 59175 CCACCACGCAGACGAAGGACCAGGTGAAGGGTGGATTCTTTCTGGATGTTGAAGTAGCTC 59116 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||| ||||||||||| || || | ||| || || | |||| Sbjct 59115 AGGGTACGTCCATCTTCCAGCTGTTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGA 59056 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| ||||| || |||| |||| ||| | | ||||| || | ||| || Sbjct 59055 ATGCCCTCTCTGTCC-TGGATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAAC 58997 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || |||||||||||||||||||| Sbjct 58996 TTCAAGAGTGATAGTTTTGCCAGTGAGGGTCTTTACGAAAATCTGCAT 58949 Score = 89.7 bits (98), Expect = 5e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| || || | ||| || || | |||| Sbjct 59343 AGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGATCTGGGGGA 59284 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| |||||| || |||| |||| ||| | | ||||| || | ||| || Sbjct 59283 ATGCCCTCTTTGTCC-TGGATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAAC 59225 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || | ||||| |||||||||||||| Sbjct 59224 TTCAAGAGTGATAGTTTTGCCAGTGACGGTCTTCACGAAAATCTGCAT 59177 >seq26467 Length=1226 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||| |||||| || ||||||||| ||||| |||||| Sbjct 810 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 751 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || ||||| ||||||||||||||||| | ||| ||||| | || Sbjct 750 AGAGTACGACCGTCCTCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCGGGAGGG 691 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||||||| ||| || ||||| | | || || || | || ||| Sbjct 690 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGTTCGACC 631 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || || || || || || || || || |||||||||||| Sbjct 630 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCATG 583 >seq176294 Length=1487 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||||| || ||| || ||||| ||||| |||||| Sbjct 1464 CCACCACGCAGACGCAGGACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGCTC 1405 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| || || | ||| ||||| | |||| Sbjct 1404 AGGGTACGTCCATCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 1345 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||| |||||| || |||| |||| ||| | | ||||| || | ||| || Sbjct 1344 ATGCCCTCTTTGTCC-TGGATTTTGGCTTTGACGTTTTCGATCGTGTCACTTGGCTCGAC 1286 Query 41815 CTCCACCGTTATCGTTTTACC 41835 || | || |||||||| || Sbjct 1285 TTCGAGGGTGATCGTTTTTCC 1265 >seq50026 Length=5431 Score = 98.7 bits (108), Expect = 9e-16 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| || || | ||| ||||| | |||| Sbjct 843 AGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGA 784 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| |||||| || |||| |||| ||| | | ||||| || | ||| || Sbjct 783 ATGCCCTCTTTGTCC-TGGATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAAC 725 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || ||||| |||||||||||||| Sbjct 724 TTCAAGAGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 677 >seq166784 Length=39261 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 |||||| || || || || ||||||| || || |||||||||||||| ||||| ||||| Sbjct 564 ACCGCCACCACGCAGGCGCAACACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTC 623 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 | ||||| || | || || |||||||||||||| || |||| | ||| ||||| Sbjct 624 GCTCAGGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTC 680 >seq14326 Length=16399 Score = 93.3 bits (102), Expect = 4e-14 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||||||||| || || | ||| ||| | | |||| Sbjct 10356 AGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGCCTGGGGGA 10415 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| |||||| || |||| |||| ||| | | ||||| || | ||| || Sbjct 10416 ATGCCCTCTTTGTCC-TGGATTTTGGCTTTGACGTTCTCGATCGTGTCACTTGGCTCAAC 10474 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || ||||| |||||||||||||| Sbjct 10475 TTCAAGAGTGATAGTTTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 10522 >seq88483 Length=20907 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||| |||||| || ||||||||| ||||| |||||| Sbjct 421 CCACCGCGCAGGCGAAGGACCAAATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 480 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||| ||||||||||| ||||| | ||| ||||| | || Sbjct 481 AGAGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGG 540 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||||||| ||| || ||||| | || || || | || ||| Sbjct 541 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGTTCGACC 600 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || || || || || || || || || |||||||||||| Sbjct 601 TCGAGTGTGATAGTCTTTCCAGTAAGTGTTTTCACAAAAATCTGCATG 648 >seq165127 Length=29611 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 |||||| || || ||||| ||||||| || || || |||||||| || ||||| ||||| Sbjct 22092 ACCGCCACCACGCAGACGCAACACCAAGTGGAGAGTACTCTCCTTTTGGATGTTGTAGTC 22033 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||| || | || || |||||||||||||| || |||| | ||| ||||| Sbjct 22032 ACTCAGGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTC 21976 >seq94379 Length=7077 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || |||||| |||||||| ||||| |||||| || || || | || || Sbjct 6926 CACAAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTC 6985 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||| ||||||||||| ||||| | ||| ||||| | |||| || ||||||||| Sbjct 6986 CAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTG 7045 Query 41773 GATTTT 41778 ||| || Sbjct 7046 GATCTT 7051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461215233628400