Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq36 96.9 4e-15 >seq36 Length=576097 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 ||||| || || ||||| || || ||||||||||| || || || || || ||||| | Sbjct 83279 GGTCGTGAATGTAGGTATCAATCAGCAGGCTGTACATCTCCGAATGGATATTTTCCATAG 83220 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 | ||||| |||||||| ||||| | |||||||| ||| ||||||||| ||||||| | Sbjct 83219 CGATCTGGAATCCGTAGAAGCACCTGGCTTCCGGTATCTGAACTTCCTGAGAGAATCGCT 83160 Query 17346 C 17346 | Sbjct 83159 C 83159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517536407096280