Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq36 98.7 1e-15 >seq36 Length=576097 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/224 (70%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 ||||||| | ||| || | ||| || || || || || ||||| | |||||| || | Sbjct 83750 CCTCGTCACGACTGATGAGTTCATTACTGAAGGTAAGACCCGGCATAATGCCACGTTTCT 83691 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | | ||||||||| || |||||||| || ||||||||| || || || || || || | Sbjct 83690 TCAACCAAAATATTGATGCAAATGACCCGCTAAAGAAAATCCCCTCCACCGCTGCGAACG 83631 Query 24277 CAATAAGTCTTTCTCCATA----ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCG 24332 | | | |||||||||| | ||| | | | | |||||| | ||||||||| Sbjct 83630 CGACGATTCTTTCTCCAAACGACACCAACTCACTGGAG-ATCCACCGGAGCGCCCAATCG 83572 Query 24333 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 || |||| ||| |||| ||||| ||||| || || || || || Sbjct 83571 GCTTTCTGTTTCACACTGGGCATCGTCTCGATTGCGTTGAACAG 83528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593711054020080