Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq91 84.2 3e-11 >seq91 Length=320879 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | ||||| || || ||||| || || || | || ||||||||| Sbjct 60641 AATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACGATTACACTTGAAGTTGAAGCAAG 60700 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||||| || | || || || || ||||| || || || || || || || Sbjct 60701 TGATACAATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGAATTCCCCCGGACCA 60760 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | || || ||||| ||||| || | ||||| |||| || | || || || Sbjct 60761 GCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAGGACGGTCGCACCCTCAGCGACTACAA 60820 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| ||||| || | ||| | || | ||| | || || || || Sbjct 60821 TATTCAAAAGGAATCCACCCTCCATCTCGTCCTGCGTCTCCGCGGAGGAAT 60871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755442581212800