Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq107 132 5e-26 >seq107 Length=284601 Score = 132 bits (146), Expect = 5e-26 Identities = 173/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| |||||| || || || | |||||||||||| || ||||| || || Sbjct 95443 GCCACCCCGTAGACGCAAGACCAAATGCAGCGTAGACTCTTTCTGGATGTTGTAGTCTGA 95502 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||| |||||||| || |||||| | || ||||| ||||| || ||||| Sbjct 95503 CAACGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGAGG 95562 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTC-CACT-GTGTCGGTGGGCTCC 139714 || || || || || ||| | |||| || | |||| || | ||||||| | ||| Sbjct 95563 GATACCCTCCTTATC-CTGAATCTTTGCCTT-GACGTTCTCAATGGTGTCGGAAGCTTCC 95620 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||||||| || | |||||| ||||||| |||||| || || ||||||||| || Sbjct 95621 ACCTCAAGTGTGATCGTCTTACCGGTCAGCGTTTTCACAAAGATTTGCATACCT 95674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496055188663200