Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq36 102 1e-16 >seq36 Length=576097 Score = 102 bits (112), Expect = 1e-16 Identities = 161/225 (72%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 ||||||| | ||| || ||||| || || || || || ||||| | |||||| || | Sbjct 83750 CCTCGTCACGACTGATGAGTTCATTACTGAAGGTAAGACCCGGCATAATGCCACGTTTCT 83691 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | | ||||||||| || ||||||||||| |||||| || || || || || || || | Sbjct 83690 TCAACCAAAATATTGATGCAAATGACCCGCTAAAGAAAATCCCCTCCACCGCTGCGAACG 83631 Query 50102 CAACAAGTCTCTCTCCATAACTGGCGC--TGTCA-TG--TATCCACTTTTGAGCCCAATC 50156 | || | ||| |||||| ||| | | | ||| || |||||| | |||||||| Sbjct 83630 CGACGATTCTTTCTCCA-AAC-GACACCAACTCACTGGAGATCCACCGGAGCGCCCAATC 83573 Query 50157 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201 ||| |||| ||| |||| |||||||| || || || || || || Sbjct 83572 GGCTTTCTGTTTCACACTGGGCATCGTCTCGATTGCGTTGAACAG 83528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718256041750440