Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq36 86.0 6e-12 >seq36 Length=576097 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||| || | ||| || ||||| || || || | || ||||| | || ||||| | Sbjct 83750 CCTCGTCACGACTGATGAGTTCATTACTGAAGGTAAGACCCGGCATAATGCCACGTTTCT 83691 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | ||||||||||||| || ||||| ||| |||||| || ||||| || || || |||| Sbjct 83690 TCAACCAAAATATTGATGCAAATGACCCGCTAAAGAAAATCCCCTCCACCGCTGCGAACG 83631 Query 13802 CTATTAGTCGTTCTCCAAACGA 13823 | | | || |||||||||||| Sbjct 83630 CGACGATTCTTTCTCCAAACGA 83609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478580299066440