Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq36 87.8 2e-12 >seq36 Length=576097 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/225 (70%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| || | ||| || | ||| || || || || || ||||| | |||||| || | Sbjct 83750 CCTCGTCACGACTGATGAGTTCATTACTGAAGGTAAGACCCGGCATAATGCCACGTTTCT 83691 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | | ||||||||| || |||||||| || |||||| || || || || || || || | Sbjct 83690 TCAACCAAAATATTGATGCAAATGACCCGCTAAAGAAAATCCCCTCCACCGCTGCGAACG 83631 Query 42207 CAATAAGTCTCTCTCCATAACCGGCACTG--TCA-TGTA--TCCACTTTTGAGCCCAATC 42261 | | | ||| |||||| | || ||| ||| || | ||||| | |||||||| Sbjct 83630 CGACGATTCTTTCTCCAAA--CGACACCAACTCACTGGAGATCCACCGGAGCGCCCAATC 83573 Query 42262 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 ||| |||| ||| |||| |||||||| || || || || || || Sbjct 83572 GGCTTTCTGTTTCACACTGGGCATCGTCTCGATTGCGTTGAACAG 83528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671127278889960