Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq56 86.0 4e-12 >seq56 Length=427550 Score = 86.0 bits (94), Expect = 4e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCG 25728 || ||||||||||| ||||| || | || ||| | |||||| | | |||| || | Sbjct 125788 GGATTCCAGGCGCAGACGATCATTCTCCGGTCGTTTGGGTTCTTCTTGATTGTCTCGATG 125729 Query 25729 GTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 25788 ||| | ||||| || || || |||| | ||| || || |||||||||||| Sbjct 125728 ACGTTCTTGAGCTGGTCGACGCCTTTCCCTGTGTAATCCGCATGACAGTCCGTGTACTCC 125669 Query 25789 GCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTA 25828 || ||||||| || ||||||||||||||| || || |||| Sbjct 125668 GCGCCGAAATGCCGCCACTGGAACCCGTAAACTGGGCCTA 125629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340131709348233