Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq107 109 4e-19 seq18 104 2e-17 >seq107 Length=284601 Score = 109 bits (120), Expect = 4e-19 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 16705 TTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTC 16764 ||| || || ||||| | || |||| ||||||||| ||||| || || ||||||||||| Sbjct 95440 TTAGCCACCCCGTAGACGCAAGACCAAATGCAGCGTAGACTCTTTCTGGATGTTGTAGTC 95499 Query 16765 GGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | || || | ||||||| | || ||||| ||| |||| || ||||| |||||| Sbjct 95500 TGACAACGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGG 95559 Query 16825 AGGCACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 ||| | ||||| || || || ||||| ||| || | | | |||||| | Sbjct 95560 AGGGATACCCTCCTTATCCTGAATCTTTGC--CTTGACGTTCTCAATGGTGTCGGAAGCT 95617 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || | ||||| || || |||||||||||||| ||||| || ||||| Sbjct 95618 TCCACCTCAAGTGTGATCGTCTTACCGGTCAGCGTTTTCACAAAGATTTGCAT 95670 >seq18 Length=819520 Score = 104 bits (114), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 16700 CGCATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTG 16759 |||| | | || || || || | || |||| |||||||| ||||| || || |||||| Sbjct 141057 CGCACTCATCCACCCCGCAGACGCAAGACCAAGTGCAGCGTCGACTCTTTCTGGATGTTG 140998 Query 16760 TAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGG 16819 || |||| || || | | ||||||| || ||||| ||| |||| |||||||| ||| Sbjct 140997 TAATCGGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAAATGAGCCGCTGCTGG 140938 Query 16820 TCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCG 16879 ||| || | || || ||||| || | | ||| || | | | |||||| Sbjct 140937 TCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTCTCGATCGTGTCGGAA 140878 Query 16880 GGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | ||| || | ||||| || || ||||||||||| ||||||||||| |||||| Sbjct 140877 GCTTCCACCTCGAGTGTGATAGTCTTCCCGGTCAGCGTCTTGACAAAAATTTGCATT 140821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405080984508790