Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq36 93.3 5e-14 >seq36 Length=576097 Score = 93.3 bits (102), Expect = 5e-14 Identities = 156/224 (70%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 ||||||| | ||| || | ||| || || || || || ||||| | |||||| || | Sbjct 83750 CCTCGTCACGACTGATGAGTTCATTACTGAAGGTAAGACCCGGCATAATGCCACGTTTCT 83691 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | | ||||||||| || |||||||| || ||||||||| || || || || || || | Sbjct 83690 TCAACCAAAATATTGATGCAAATGACCCGCTAAAGAAAATCCCCTCCACCGCTGCGAACG 83631 Query 32803 CAATAAGTCTCTCTCCATA----ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCG 32858 | | | ||| |||||| | ||| | | | | |||||| | ||||||||| Sbjct 83630 CGACGATTCTTTCTCCAAACGACACCAACTCACTGGAG-ATCCACCGGAGCGCCCAATCG 83572 Query 32859 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 || |||| ||| |||| ||||| ||||| || || || || || Sbjct 83571 GCTTTCTGTTTCACACTGGGCATCGTCTCGATTGCGTTGAACAG 83528 Score = 82.4 bits (90), Expect = 1e-10 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990 || |||||||||| || || ||||| |||||||| || ||||| || || || || ||| Sbjct 83268 TAGGTATCAATCAGCAGGCTGTACATCTCCGAATGGATATTTTCCATAGCGATCTGGAAT 83209 Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 ||||||||||| || || || | ||||| ||||| Sbjct 83208 CCGTAGAAGCACCTGGCTTCCGGTATCTGAACTTC 83174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633620745111600