Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq36 96.9 4e-15 seq98 95.1 1e-14 >seq36 Length=576097 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| ||||| || | ||| ||||| || ||||||| ||| ||||| || || ||| Sbjct 83271 ATGTAGGTATCAATCAGCAGGCTGTACATCTCCGAATGGATATTTTCCATAGCGATCTGG 83212 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477 ||||||||||| || || ||||||| ||||| ||||| ||||| |||| ||| || Sbjct 83211 AATCCGTAGAAGCACCTGGCTTCCGGTATCTGAACTTCCTGAGAGAATCGCTCGAC 83156 >seq98 Length=303023 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192 ||||||||||||||| || || || | ||||| ||||| |||||||| || || || || Sbjct 281488 CTCATTGCTGAATGTCAAGCCGGGCATGAGTCCCCGTTTTTTGAGCCAGAAGATGGAGGC 281429 Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 || || || || || || ||||| | ||||| ||||| || ||||| || | Sbjct 281428 GAATGAGCCGCTGAAGAAGATCCCCTCCACCGAGGCAAAGGCCACGATGCGTTCTCCATA 281369 Query 93253 ATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 | ||| | ||||| ||||| | | ||||| |||||||| ||| | | ||||| Sbjct 281368 GGTGGCGTTGGTGCTGCTCATCCAGCTGAGTGCCCAGTCGGCTTTCTTCCTGACGCAAGG 281309 Query 93313 TAGTGTTTCGATAGCGTTAAATAGGTA 93339 | || || || ||||| || ||||| Sbjct 281308 CATGGTGTCAATCGCGTTGAAGAGGTA 281282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556850908760040