Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq207 84.2 5e-11 >seq207 Length=153891 Score = 84.2 bits (92), Expect = 5e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 68421 GAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGA 68480 ||| | || || ||||| || || || || |||| ||| | || || ||||| || || Sbjct 89381 GAGCTCTACGGCAAAGTACAGGAGATCCCGCAGAAGGAGACAACGCCATTTTACCCGCGG 89322 Query 68481 AGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAA-AATTACCGTGAGTC 68539 || ||||| || || ||||||||||| || ||||| ||||| || | ||| || | Sbjct 89321 TCACCGTACGGCGTGGCTAAGTTGTACGCCTACTGGAT-TGTAATCAACTTCCGGGAAGC 89263 Query 68540 GTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGTCC 68587 || ||||||| | ||||| |||| |||||| ||||||||||| Sbjct 89262 TTACAACATGTTCGCTTGCAATGGGATTCTTTTCAACCACGAGAGTCC 89215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102859920346350