Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-15 >seq3 Length=1595396 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 171908 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATTG 171967 |||||||| ||| ||||| || ||||| || |||||||| ||| |||||||| ||| Sbjct 353399 TCTTTGCCGCCCTGAAGACGGGTGCCAAACTGGCCACACGGCAAAAGAAGATTGATGTTG 353458 Query 171968 TTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCG 172027 || || | |||||| | |||| ||| || || | ||||||||||| ||| Sbjct 353459 TTACTGCCGACGTAGTCTTGCGCCAGACCGACGATGGTGGACTGAAGGGAGACTTCGCCG 353518 Query 172028 TGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTCATCC 172087 ||||| || ||||| || || || || | |||| ||||| |||||||| | || | Sbjct 353519 TGATGATAAGCCGATTTCTCGGCCACCGAACCCGCTAACTGGGCCACCTTGACTTCCTTT 353578 Query 172088 TTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTG 172128 || ||| ||||||| | || || ||||||| ||| Sbjct 353579 CTGTCGTTACGAAGGAAGCAGGTGTAGATCACCTTTCGCTG 353619 Score = 84.2 bits (92), Expect = 3e-11 Identities = 173/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 171880 TGTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATT 171938 |||||||||||| | | || ||| ||||| || ||| ||||| || ||||| | Sbjct 361650 TGTGAAGATGTAACGGGACTGG--CGCTGTCTTTTCCGCCCTGAAGACGGGTGCCAAACT 361707 Query 171939 GACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCA-ACTTG 171997 | |||||||| ||| |||||||| ||||| || | |||||| | |||| | | Sbjct 361708 GGCCACACGGCAAAAGAAGATTGATGTTGTTACTGCCGACGTAGTCTTGCGCCACAACCG 361767 Query 171998 ACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATAC 172057 || || | | |||||||||||| |||||||| || ||||| || || || || | Sbjct 361768 ACGATGGGGGACT-GAGGGAGACTTCGCCGTGATGATAAGCCGA-TTCTCGGCCACCGAA 361825 Query 172058 GCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATG 172117 |||| ||||| |||||||| | || | || ||| ||||||| | || || Sbjct 361826 CCCGCTAACTGGGCCACCTTGACTTCCTTTCTGTCGTTACGAAGGAAGCAGGTGTAGATC 361885 Query 172118 ACCTTTCTCTG 172128 ||||||| ||| Sbjct 361886 ACCTTTCGCTG 361896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597342989506680