Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 2e-11 seq107 82.4 5e-11 >seq18 Length=819520 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || |||||||| |||||||| ||| ||| | | |||| || || || Sbjct 139894 ATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCGGAGAGCGTCCGACCGTCCTCCAACTG 139835 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || ||| | |||| |||||| || || ||||| ||||||||||| ||||| Sbjct 139834 CTTTCCCGCGAAGATCAGACGCTGCTGATCCGGAGGAATACCTTCCTTGTCCTGGATTTT 139775 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 | || || |||| || ||||| || || || || | ||| ||||| ||||||| Sbjct 139774 GGCCTTGACGTTTTCGATCGTATCACTTGCCTCAACTTCGAGGGTGATGGTCTTACCTG 139716 >seq107 Length=284601 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||| ||||| || || || || ||||||||||| |||| ||| |||| || Sbjct 96580 AACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTTCGACCGTCCTC 96639 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 ||||| || || ||| | |||| ||||| || || ||||| ||||||||||| Sbjct 96640 CAATTGCTTCCCCGCGAAAATCAGCCGCTGCTGATCCGGAGGAATACCTTCCTTGTCCTG 96699 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCT 15119 ||||||| ||| || | || || ||||| || Sbjct 96700 AATTTTGGCTTTGACGTTCTCAATCGTATCACT 96732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357385810528985