Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 105 8e-18 >seq3 Length=1595396 Score = 105 bits (116), Expect = 8e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 175928 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTG 175987 |||||||| ||| ||||| || ||||| || ||||| ||| ||| |||||||| ||| Sbjct 353399 TCTTTGCCGCCCTGAAGACGGGTGCCAAACTGGCCACACGGCAAAAGAAGATTGATGTTG 353458 Query 175988 TTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCG 176047 || ||| | ||||| | ||||| ||| || || | ||||||||||| ||| Sbjct 353459 TTACTGCCGACGTAGTCTTGCGCCAGACCGACGATGGTGGACTGAAGGGAGACTTCGCCG 353518 Query 176048 TGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCATCC 176107 ||||| || ||||| || || ||||| | |||| ||||| |||||||| | || | Sbjct 353519 TGATGATAAGCCGATTTCTCGGCCACCGAACCCGCTAACTGGGCCACCTTGACTTCCTTT 353578 Query 176108 TTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTG 176148 || ||| ||||||| | || || ||||||| ||| Sbjct 353579 CTGTCGTTACGAAGGAAGCAGGTGTAGATCACCTTTCGCTG 353619 Score = 93.3 bits (102), Expect = 5e-14 Identities = 175/251 (70%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 175900 TGTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATT 175958 |||||||||||| | | || ||| ||||| || ||| ||||| || ||||| | Sbjct 361650 TGTGAAGATGTAACGGGACTGG--CGCTGTCTTTTCCGCCCTGAAGACGGGTGCCAAACT 361707 Query 175959 GACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCA-ACTTG 176017 | ||||| ||| ||| |||||||| ||||| ||| | ||||| | ||||| | | Sbjct 361708 GGCCACACGGCAAAAGAAGATTGATGTTGTTACTGCCGACGTAGTCTTGCGCCACAACCG 361767 Query 176018 ACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATAC 176077 || || | | |||||||||||| |||||||| || ||||| || || ||||| | Sbjct 361768 ACGATGGGGGACT-GAGGGAGACTTCGCCGTGATGATAAGCCGA-TTCTCGGCCACCGAA 361825 Query 176078 GCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATG 176137 |||| ||||| |||||||| | || | || ||| ||||||| | || || Sbjct 361826 CCCGCTAACTGGGCCACCTTGACTTCCTTTCTGTCGTTACGAAGGAAGCAGGTGTAGATC 361885 Query 176138 ACCTTTCTCTG 176148 ||||||| ||| Sbjct 361886 ACCTTTCGCTG 361896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496302578360