Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq21 143 2e-28 >seq21 Length=757752 Score = 143 bits (158), Expect = 2e-28 Identities = 312/463 (67%), Gaps = 12/463 (3%) Strand=Plus/Plus Query 518196 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 518255 |||| |||||||| || || | || |||||| | ||| | |||| || || || || | Sbjct 737160 CAGTCGGTTCATTGATGATACGCAGAACATTCAAACCGGAGATTCGGCCGGCGTCCTTCG 737219 Query 518256 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT 518315 | ||||||| |||||||| || ||||| || || || ||||| ||||| || | || | Sbjct 737220 TAGCTTGTCGCTGTGAATCATTGAAATAAGCGGGCACGGTAATGACGGCGTCCTTCACCT 737279 Query 518316 CTTTACCAATATAAGCGCTT-GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 | || | | ||| || ||||| | ||||| || | || | ||| | |||| Sbjct 737280 TTCCTCCCA-AGAAGGCCTCCGCCGTCTCCTTCATCTTGCCCAAGACCATAGCACTAATT 737338 Query 518375 TGTTCTGGGGAATATTGCTTGGATTCATTTTGAT-ATGATA----CTTCAAAATATGGTT 518429 | ||||||| || | ||| | | | |||| |||| | |||| Sbjct 737339 TCTTCTGGGC-----TGAAGGTCTTCTTCTCGCCCATGAACTCCGCTTCGATCATCGGTT 737393 Query 518430 TATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGT 518489 | ||| || ||||| || || ||||| | ||||| |||| |||||| | | Sbjct 737394 TGGTACTCTTGTTGATAACCTTGAACGGCCAATGCTTCATGTCTGCCTGAACAGACTCAT 737453 Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG 518549 | | || | || ||| || | ||||| || || || | || ||||| ||||| || | Sbjct 737454 CGTCGAACTTTCGACCGATCAGACGTTTCGCGTCGAACACCGTGTTGGTGGGATTCATGG 737513 Query 518550 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 518609 | |||||| |||||| ||||| || | || |||| || ||||| |||| ||||| | Sbjct 737514 CGACTTGATTTTTGGCGGCATCGCCGACTAGGCGTTCGGTATCTGTGAATGCCACATAGG 737573 Query 518610 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 518652 ||||||| ||||| || |||||||| || ||||||||||| || Sbjct 737574 ATGGAGTGGTGCGGTTGCCTTGATCGTTGGCAATAATTTCCAC 737616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780751885299226